Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1310 91.5 1e-13 >seq1310 Length=240470 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 18966 CCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAA 19025 ||| | |||| || || || || ||| | | || ||||| ||||| ||||||| Sbjct 118333 CCCCTCATGGCTCTGCCGCCCTGCCACGCTCTCTGCCAGTTCTACGTGTGTGACGGTGAG 118392 Query 19026 TTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATT 19085 | || || || | |||||| | ||||| |||||||| || || || ||||||||||| Sbjct 118393 CTGTCGTGTCAGCTGTACCAGCGCTCGGGTGATATGGGTCTGGGAGTGCCGTTCAACATC 118452 Query 19086 GCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || | ||||| || || |||||||| | || || |||||||||| || Sbjct 118453 GCCAGCTATGCGCTCCTCACCTACATGATCGCTCACATTACAGGACTCAA 118502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399475672419810