Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq755 502 3e-137 seq1980 87.8 2e-12 >seq755 Length=318311 Score = 502 bits (556), Expect = 3e-137 Identities = 1293/1960 (66%), Gaps = 21/1960 (1%) Strand=Plus/Plus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||||| ||||| || ||||| | ||||| || | || | || || || || || Sbjct 109820 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 109879 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || | ||||| || || |||| || || || ||||| || || ||||| || | || Sbjct 109880 ACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 109939 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 109940 ATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 109999 Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 53326 | || || || | |||| | | ||| || || || || | | ||| | ||| || Sbjct 110000 AGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 110059 Query 53327 TCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATC 53384 || | ||| | | | || || || || || ||| | || | Sbjct 110060 TCGGTCGG--CGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAGC 110117 Query 53385 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 53444 | | || || ||||| || || || | || || || || |||||||| | ||| Sbjct 110118 CCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCAG 110177 Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 |||| || ||||| |||||||| | | || || || || || |||| ||||| | Sbjct 110178 CGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAACG 110237 Query 53505 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 53564 | | | | ||| || || ||||||||||| ||||| || || || ||||| || || | Sbjct 110238 GGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGT 110297 Query 53565 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624 | | ||| || || | |||||||| || | || || || || || || ||||| || | Sbjct 110298 GGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGT 110357 Query 53625 TGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCA- 53683 | |||||| |||| ||||||||| |||| | |||||| ||| ||||| |||| Sbjct 110358 TCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAA-GTCCGC 110416 Query 53684 TCTA---TTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTA 53740 || | || ||||||| | || || || ||||||||||| || |||||||| | | Sbjct 110417 TCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCA 110476 Query 53741 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 53800 | |||| | || || ||||| || || || ||||||||||| || | ||| Sbjct 110477 TGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTC 110536 Query 53801 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCA 53860 || || || ||||| |||| || || || || || || ||| | |||||||| || || Sbjct 110537 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCC 110596 Query 53861 ATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTC 53920 |||| || || || || || | ||| | ||||||| | | | ||| ||| Sbjct 110597 GTCTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTC 110656 Query 53921 TTTTCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 ||| | || || | ||||| | | |||||||| || ||||| | ||||| Sbjct 110657 CCTTCCTTCTCATACCTGGTGTAGAGCTCC--TCAAACTCCTCCCCCCAGCACTCGTCCA 110714 Query 53979 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 54038 ||||||||| | | |||||||||| ||||| || || || ||| | |||| Sbjct 110715 GTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCA 110774 Query 54039 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 | || ||||| || |||||||| || || ||| || ||||||| || || ||||| ||| Sbjct 110775 TGAACAGATCGGGGATCCAAAGGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTT 110833 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 ||||| ||||| || || |||||||| | | | ||| | |||||||| |||||||| Sbjct 110834 CCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTAC 110893 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 |||| | |||| || | ||||| || ||||| || | ||| | || ||||| || Sbjct 110894 ATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTG 110953 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 |||||||||| ||| || | | || ||||| |||||||| || ||||| |||||| Sbjct 110954 TAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTT 111013 Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337 || ||| | || || | | | ||| || || || ||| || ||||| | Sbjct 111014 CCTGTGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGG 111073 Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397 || || | || | || ||||||||||| || || || || || ||||| || || Sbjct 111074 GCACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGG 111133 Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457 || ||||| |||| || | | | ||||| || || || | || || || ||||| Sbjct 111134 AAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGG 111193 Query 54458 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGA 54517 || ||||| || || || || || ||||| |||||||| |||| || || ||| || Sbjct 111194 GTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTG 111253 Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577 || |||||||| | || | ||| | ||||||||| || | || | | ||| ||| Sbjct 111254 TGGATTCCTACGGACACCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTG 111313 Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 54637 || |||| || ||||| |||| ||| || || || || ||||||| || || ||| Sbjct 111314 ATCTTCAACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCT 111373 Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 54697 | ||| | || || | |||||||| || || | | ||| | || | || Sbjct 111374 CTGTCGAAGATTATGGCCGAGTTGAGGCGGTCTTTGTTCTCAAGAACAATGTCGAGCGTC 111433 Query 54698 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTA--GGATTGACATAGTTAAATAAAT 54755 |||| || || || || || | | || | || ||||| ||||| | | | Sbjct 111434 TCCTTTGAGATCATGGGGGA--GTGGCGTTTGTTCAAGGGGTTGACGTAGTTGTACAGGT 111491 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 ||| ||| || || || || | ||| || || || ||||| || || || || || || | Sbjct 111492 CCTCCATGACGTCGCTGAACACTTTCTTGGTCTCCTTGTGCAGGTTAGAGACAGCGATCC 111551 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 54875 ||| || || ||||| || || || |||| || || |||||| || || || || | Sbjct 111552 GAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGAGTGGCAGCGATCTCTGCAG 111611 Query 54876 TCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 54935 || ||||| | || || || || ||||| | || | || ||||| |||||||| | Sbjct 111612 CCAACGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAAACCCTGGATCACCTTCATGG 111671 Query 54936 CTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCT-AATACGA 54994 || | || || | | |||| ||| | || || || || |||| || ||| Sbjct 111672 TAATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCGA 111730 Query 54995 GATGTGATTTTATCAAACATGACATTTTCCTTGTATCCAT 55034 || |||||||| || |||||||| ||||| | ||||| Sbjct 111731 GAGGTGATTTTGTCGAACATGACGCGTTCCTGGCGTCCAT 111770 >seq1980 Length=102293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 || || || || || | |||||||| || || || ||||| || || || || | ||| Sbjct 6658 GTGCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCTGACAGCAAGTTG 6717 Query 54485 TACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 54544 || || || || ||||| || || || | || ||||||||| ||||| || | ||| | | Sbjct 6718 TAGGTGTCAATGGCTGAATCAATGTCTCCTTTATGAATTCCAACTGCCACTCTCATCAGC 6777 Query 54545 ATGTGCTGAGGTCTTTCA 54562 ||||||||||| || ||| Sbjct 6778 ATGTGCTGAGGCCTCTCA 6795 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| || || || ||||| || || |||||| || | || || ||||||||||||| Sbjct 3987 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCTATATGGATAT 4046 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 | | || || || || || ||| |||| || | ||||| ||||| || | | ||||| Sbjct 4047 TAAGGGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCTGCCATCTTGAGAACCGTCT 4106 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 53043 | || | |||||||| | |||||||| | |||| | ||| || || Sbjct 4107 TCTGGGAGATTTCCCACACTGTTTTATAGAGCTGCTTCAGATCATCAGG 4155 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| || || |||||||| || || || || || | | || || || | Sbjct 7740 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCCACCCGCGCAGCCAGGA 7799 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | || || || ||||||| || || ||||| || | || |||| ||||||||||| Sbjct 7800 TTGCGTAGTCAGGATGTTTAGTGGTGAGCGTGGCAGCAGTCTCCGCTGCCAGAGTGTCCA 7859 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || |||||| | || | || ||||| |||||||| Sbjct 7860 GTTCCACGGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 7905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593678421596640