Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1721 113 4e-20 seq210 104 2e-17 >seq1721 Length=144067 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || ||||| ||||| ||||| | ||||| || | ||||||||||| ||||| Sbjct 118352 GTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 118293 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | ||||| ||||||||||| ||| | ||| |||||||| |||||| || Sbjct 118292 GCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTG 118233 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| |||||| || | ||| ||||||||||| || | || Sbjct 118232 ACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTC 118173 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 118172 TTGACGAAGATCTGCAT 118156 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||| ||||| Sbjct 118124 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 118065 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | ||||||||||| ||| | |||||||||||| ||| || || Sbjct 118064 GCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTG 118005 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || |||| |||||| || | ||| ||||||||||| || | ||| Sbjct 118004 ACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTT 117945 Query 21159 TTGACAAATATTTGCATTTT 21178 || ||||| || ||||| || Sbjct 117944 TTCACAAAGATCTGCATGTT 117925 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||||||||| || ||||| ||||| | ||||| || | ||||||||||| ||||| Sbjct 118581 AGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCC 118522 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | || | ||||||||||| ||| | ||||||||||| |||||| || Sbjct 118521 AGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTT 118462 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | ||| || || | |||||| |||| ||| |||||||| || || | || Sbjct 118461 GACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGT 118402 Query 21158 TTTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 118401 CTTGACGAAGATCTGCAT 118384 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | ||||||||||| ||||| Sbjct 109093 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 109034 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 || | || | ||||||||||| ||| | |||||||||||| Sbjct 109033 GCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 108990 >seq210 Length=679747 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||| || || ||||| ||||| | ||||| | | || |||||||| || || Sbjct 555729 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCA 555670 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || ||||||||||| || | || || ||||| ||||||| |||| Sbjct 555669 GCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTTGCTTTC 555610 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | ||||||| |||| ||| |||||||| || || || || Sbjct 555609 ACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTC 555550 Query 21159 TTGACAAATATTTGCATTTTGA 21180 || ||||| || ||||| |||| Sbjct 555549 TTCACAAAGATCTGCATCTTGA 555528 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | |||||||| || || ||||| ||||| | || || | | || Sbjct 555972 AGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCT 555913 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || || ||||||||||| || | || || ||||| Sbjct 555912 TCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCC 555853 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || ||| || | ||| ||| || | ||||||| |||| || |||||| Sbjct 555852 TGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTC 555793 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || || ||||| || ||||| Sbjct 555792 TTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422229258919688