Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq755 147 2e-30
seq1721 118 9e-22
seq465 87.8 2e-12
>seq755
Length=318311
Score = 147 bits (162), Expect = 2e-30
Identities = 485/734 (66%), Gaps = 30/734 (4%)
Strand=Plus/Plus
Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281
||||||| | ||||||||||||| ||||| | | | || | || ||| | |
Sbjct 109875 GGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGG 109934
Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCA 133341
|||| || |||||||| || || ||||| || || | || |||||||| ||||
Sbjct 109935 CCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 109994
Query 133342 CCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCC 133401
|| || ||| || ||||||| ||| || || || || ||||||||||
Sbjct 109995 GCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCC 110054
Query 133402 ACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATAC 133461
|||| || || | | || | ||||| | | | || || | |||| || |
Sbjct 110055 ACAG---GTCGG-----TCGGCGTC-TTCTC--CCACAT-GTCGT---ACTGCAGGATGC 110099
Query 133462 CCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTG--GCCAGCTC 133519
|| |||| || || | || ||||| || ||||| ||| | | | ||||||||
Sbjct 110100 CCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGA--ACTCGGCTGCCAGCTC 110157
Query 133520 GCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGAT-TGAATAGTTGACGAACC 133578
|||||| ||||||| ||| || |||| ||||| || ||| || || ||||| | | |
Sbjct 110158 GCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGAT-GTTGA-GCAGC 110215
Query 133579 TG-GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCCTG 133636
|| || ||| ||| || | | | || || | || | || ||||| || ||||| ||
Sbjct 110216 TGAGCCTCGGGGCTTTCAAACGGG-TGACGCATGAGGATGAAGGCGTCTGCTAAACCTTG 110274
Query 133637 TATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTC-GGCCGTGGGAT 133695
| |||| ||||| || | || || ||| |||| | || ||| |||| |
Sbjct 110275 CACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGG-T 110333
Query 133696 AGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCA 133755
||| ||||| |||||| |||||||| || || |||||| | ||| || | || ||
Sbjct 110334 AGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGCCA 110393
Query 133756 GCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGG 133815
| | ||||||| ||| || || || |||| || |||||| ||| || ||
Sbjct 110394 GTTTTTTAAAGTCAAAAGTCC--GCTCCGGGGT-GACGTACATGTTGAGGGCGATGGAGG 110450
Query 133816 CTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGT 133875
| |||||||| || || ||||| | | | || | |||||| || | ||||||||
Sbjct 110451 CCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGT 110510
Query 133876 TGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGT 133935
||||||| ||||||||||||| ||| | || ||||| | ||||| || ||||
Sbjct 110511 TGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGT 110570
Query 133936 ATAGCATGTACGGC 133949
| ||||||||||||
Sbjct 110571 ACAGCATGTACGGC 110584
>seq1721
Length=144067
Score = 118 bits (130), Expect = 9e-22
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| ||| || |||||
Sbjct 118131 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 118072
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| |||| | | |||||| || || || ||||| |||||||| |||||
Sbjct 118071 CTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTT 118012
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| || ||||||||||| ||| | || ||||| ||
Sbjct 118011 AGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGT 117952
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| |||||||||
Sbjct 117951 GAGGGTTTTCACAAAGATCTGCATG 117927
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||||| || || |||||||| |||||||| || | ||||| |||
Sbjct 118368 CAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118309
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || ||||| |||| || | |||||| || || || ||||||||||||||
Sbjct 118308 CTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 118249
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || || || | || | |||||| || ||||||||| | ||| | ||
Sbjct 118248 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 118189
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || || ||||||||
Sbjct 118188 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
>seq465
Length=450798
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
|||| || |||||||| ||| || ||||| |||||||||||||||||||||| |||
Sbjct 34316 CTTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCCTCGAGCTGTTTTCCAGCGAAGA 34257
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCC 118636
| |||||||||||||| || || || ||
Sbjct 34256 TCAGACGCTGCTGATCAGGGGGAATTCC 34229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433799638442056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |