Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq755 147 2e-30 seq1721 118 9e-22 seq465 87.8 2e-12 >seq755 Length=318311 Score = 147 bits (162), Expect = 2e-30 Identities = 485/734 (66%), Gaps = 30/734 (4%) Strand=Plus/Plus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281 ||||||| | ||||||||||||| ||||| | | | || | || ||| | | Sbjct 109875 GGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGG 109934 Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCA 133341 |||| || |||||||| || || ||||| || || | || |||||||| |||| Sbjct 109935 CCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 109994 Query 133342 CCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCC 133401 || || ||| || ||||||| ||| || || || || |||||||||| Sbjct 109995 GCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCC 110054 Query 133402 ACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATAC 133461 |||| || || | | || | ||||| | | | || || | |||| || | Sbjct 110055 ACAG---GTCGG-----TCGGCGTC-TTCTC--CCACAT-GTCGT---ACTGCAGGATGC 110099 Query 133462 CCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTG--GCCAGCTC 133519 || |||| || || | || ||||| || ||||| ||| | | | |||||||| Sbjct 110100 CCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGA--ACTCGGCTGCCAGCTC 110157 Query 133520 GCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGAT-TGAATAGTTGACGAACC 133578 |||||| ||||||| ||| || |||| ||||| || ||| || || ||||| | | | Sbjct 110158 GCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGAT-GTTGA-GCAGC 110215 Query 133579 TG-GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCCTG 133636 || || ||| ||| || | | | || || | || | || ||||| || ||||| || Sbjct 110216 TGAGCCTCGGGGCTTTCAAACGGG-TGACGCATGAGGATGAAGGCGTCTGCTAAACCTTG 110274 Query 133637 TATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTC-GGCCGTGGGAT 133695 | |||| ||||| || | || || ||| |||| | || ||| |||| | Sbjct 110275 CACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGG-T 110333 Query 133696 AGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCA 133755 ||| ||||| |||||| |||||||| || || |||||| | ||| || | || || Sbjct 110334 AGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGCCA 110393 Query 133756 GCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGG 133815 | | ||||||| ||| || || || |||| || |||||| ||| || || Sbjct 110394 GTTTTTTAAAGTCAAAAGTCC--GCTCCGGGGT-GACGTACATGTTGAGGGCGATGGAGG 110450 Query 133816 CTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGT 133875 | |||||||| || || ||||| | | | || | |||||| || | |||||||| Sbjct 110451 CCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGT 110510 Query 133876 TGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGT 133935 ||||||| ||||||||||||| ||| | || ||||| | ||||| || |||| Sbjct 110511 TGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGT 110570 Query 133936 ATAGCATGTACGGC 133949 | |||||||||||| Sbjct 110571 ACAGCATGTACGGC 110584 >seq1721 Length=144067 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||| || ||||| Sbjct 118131 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 118072 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| | | |||||| || || || ||||| |||||||| ||||| Sbjct 118071 CTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTT 118012 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| || ||||||||||| ||| | || ||||| || Sbjct 118011 AGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGT 117952 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| ||||| ||||||||| Sbjct 117951 GAGGGTTTTCACAAAGATCTGCATG 117927 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || || |||||||| |||||||| || | ||||| ||| Sbjct 118368 CAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118309 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || ||||| |||| || | |||||| || || || |||||||||||||| Sbjct 118308 CTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 118249 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || || || | || | |||||| || ||||||||| | ||| | || Sbjct 118248 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 118189 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || || |||||||| Sbjct 118188 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 >seq465 Length=450798 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||| || |||||||| ||| || ||||| |||||||||||||||||||||| ||| Sbjct 34316 CTTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCCTCGAGCTGTTTTCCAGCGAAGA 34257 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCC 118636 | |||||||||||||| || || || || Sbjct 34256 TCAGACGCTGCTGATCAGGGGGAATTCC 34229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433799638442056