Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq86 105 1e-17 >seq86 Length=915686 Score = 105 bits (116), Expect = 1e-17 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 51893 GAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCA 51952 |||| | |||| ||| | | | ||||| || || ||||| |||| || |||||||||| Sbjct 258808 GAGCTCTGTGGTGGTATTTTGTCTCCAAGGGAATCGAATATCTGGACACTGTATTTTTCA 258749 Query 51953 TACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGT 52012 | || ||||||||||| || ||||||| || || ||||| || || || | || |||| Sbjct 258748 TCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCACCATGT 258689 Query 52013 TTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 | || || | ||||| || || |||||| | || ||||| || Sbjct 258688 TCACGCTCTGGTGGATTGGCATCAAATGGGTGGCAGGAGGACA 258646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923129660512720