Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1721 116 2e-21 seq210 107 1e-18 >seq1721 Length=144067 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| | ||| | ||| || ||||| | || || ||||| |||||||||||||| Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| ||||| || | || ||||||||| ||| Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| || || ||| | || | || | || | | ||||| Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 117975 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| |||||||||||||||||||| Sbjct 117974 TCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 117928 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| | ||| | |||||| ||||| | || |||||| || ||||||||||| || Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| || || || |||| ||||||||| ||| Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | || | || | | ||||| Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 118203 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || || ||||||||||| Sbjct 118202 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| ||||||||||| || Sbjct 118610 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 118551 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| ||||| || | || ||||||||| ||| Sbjct 118550 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118491 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | || | ||| | | || || Sbjct 118490 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 118431 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || ||||| || || || ||||||||||| Sbjct 118430 TCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384 >seq210 Length=679747 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||||||||| | || |||||||| ||||||||||| || Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| |||||| || || || || |||| ||||||||| || Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||| ||||| || ||| ||||| | | | || | ||| | | || || Sbjct 555867 ATCCCCTCTTTGTCCTGGAT-TTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCAC 555809 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||||||||| || ||||||||||||||||| Sbjct 555808 CTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| || || || | || |||| |||||| || || || Sbjct 555723 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAAT 555664 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || |||| ||||||||| || | | ||| ||||| |||||| ||||| | || Sbjct 555663 ATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTT-GCTTTCACATT 555605 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 |||| | ||| | | || || |||| |||||||| || || || | || ||||| Sbjct 555604 CTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCAC 555545 Query 34378 AAAGATCTGCATC 34390 ||||||||||||| Sbjct 555544 AAAGATCTGCATC 555532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323049091974080