Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq82 340 1e-88
>seq82
Length=938037
Score = 340 bits (376), Expect = 1e-88
Identities = 621/892 (70%), Gaps = 18/892 (2%)
Strand=Plus/Minus
Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750
|| |||||||| ||| | |||| |||||||| ||||| |||||| ||||||||||||||
Sbjct 67496 CTCAGTAAAGAGGAGGAAAACTTTCCCATTGCGTACTCAATGGTGATCCATGAGAAGATT 67437
Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810
|| | ||||| || || |||||||| ||||| || || |||||| | ||||| || ||
Sbjct 67436 GAGATGTTTGAGCGACTTCTGCGAGCTGTGTACGCGCCCCAGAACGTCTACTGCGTACAT 67377
Query 107811 GTGGATGTGAAGTCCCCAG-AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTT 107869
||||| ||||||| | | ||| ||||| | || | || ||||||| ||| |||||
Sbjct 67376 GTGGACCAGAAGTCCTCTGCAGAGTTTCAGAAAG-CTGTGGCGGCCATTGCTTCATGCTT 67318
Query 107870 CCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGT 107929
|| ||||| || | ||||| ||||| | | |||||| || ||||| |||||||||||
Sbjct 67317 TCCTAATGTGTTTGTAGCCAGCAAGTTAGAACGGGTGGTGTACGCCTCGTGGTCCAGAGT 67258
Query 107930 GCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTT 107989
||| || || |||||||| ||| | || |||| || |||| |||| |||| |
Sbjct 67257 GCAGGCAGATCTGAACTGCATGAAGGATCTGCTGCACTCTCCAGTCAACTGGAGGTACCT 67198
Query 107990 ACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCT 108049
||||| || |||||||||||||||||||| || || |||| |||||||| || ||
Sbjct 67197 GCTGAACACCTGCGGGACAGACTTCCCCATCAAAACAAATGGAGAGATGGTAAAAGCACT 67138
Query 108050 CAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaa 108109
||| | || || |||||||| |||||| ||| || | ||||| ||| ||||
Sbjct 67137 GAAGGCCCTCAATGGAAAGAACAGCATGGAGAGTGAAGTCACCAGTGAGTACAAGAAAAC 67078
Query 108110 TCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGA 108169
|||||| | | | || | || || || || | | | || | || | |
Sbjct 67077 CCGCTGGCAGTTTCATTACAACGTCACTGATGGCCT---CACAAACACATACGTGCACAA 67021
Query 108170 CCCTCCCC--CTGAT-AATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCG 108226
||||||| | || | ||||||||| | || |||||||| ||||||| | | |
Sbjct 67020 ACCTCCCCCGCCCATCAGCAGCCCCATGTTCTCTGGAAATGCCTACTTTGTGGTCACAAG 66961
Query 108227 AGCCTTTGTCCAACATGTCTTAGACAAC-CCTAAATCCCAAAGACTGGTTGAATGGGTCA 108285
||||||||| | || || | || || | || | |||| | | || |||| |
Sbjct 66960 AGCCTTTGTGAAGCACGTGATGGAGGACGGAGAGATTCAAAAG-TTTCTGGAGTGGGAGA 66902
Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGC 108345
| ||||| || ||||| || || ||||| ||||||||| | ||| | ||| | | |
Sbjct 66901 AGGACACGTACAGCCCTGATGAGCACCTGTGGGCCACCTTGCAGAGGATTCCTTCAGTTC 66842
Query 108346 CTGGCTCTGTTCCTAGCCA-CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGG 108404
| || ||||| ||| |||| | ||||||| |||||||||||||| ||| ||||| |
Sbjct 66841 CCGGATCTGTGCCT-GCCAGCGACAAGTATGACATCTCAGACATGCAGGCCCTCGCCCGC 66783
Query 108405 CTCGTCAAGTGGCAGTACCACGAGGGAGATGT-CAGCATGGGGGCGCCTTATGCACCCTG 108463
| ||||||||| || || |||||| | || | || | | ||| | | || ||
Sbjct 66782 GTGGTCAAGTGGAGCTATTTAGAAGGAGATATGCAAAAAGGAGCCCCCTACTAC-CCGTG 66724
Query 108464 CTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCT 108523
| || || || | || ||| | ||| | || || | |||||| | ||||| | ||
Sbjct 66723 TACCGGTATTCACAGAAGAGCCGTGTGCGTGTATGGAGTTGGGGACATCAACTGGGTCCT 66664
Query 108524 CCAG--AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATA 108573
|| |||| |||||| |||| ||||||||||| || ||| |||||||
Sbjct 66663 -GAGTCAACC-TCACCTGCTGGCCAACAAGTTTGATCCTGAGGTTGATGATA 66614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348244105347732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |