Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq82 340 1e-88 >seq82 Length=938037 Score = 340 bits (376), Expect = 1e-88 Identities = 621/892 (70%), Gaps = 18/892 (2%) Strand=Plus/Minus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 || |||||||| ||| | |||| |||||||| ||||| |||||| |||||||||||||| Sbjct 67496 CTCAGTAAAGAGGAGGAAAACTTTCCCATTGCGTACTCAATGGTGATCCATGAGAAGATT 67437 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 || | ||||| || || |||||||| ||||| || || |||||| | ||||| || || Sbjct 67436 GAGATGTTTGAGCGACTTCTGCGAGCTGTGTACGCGCCCCAGAACGTCTACTGCGTACAT 67377 Query 107811 GTGGATGTGAAGTCCCCAG-AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTT 107869 ||||| ||||||| | | ||| ||||| | || | || ||||||| ||| ||||| Sbjct 67376 GTGGACCAGAAGTCCTCTGCAGAGTTTCAGAAAG-CTGTGGCGGCCATTGCTTCATGCTT 67318 Query 107870 CCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGT 107929 || ||||| || | ||||| ||||| | | |||||| || ||||| ||||||||||| Sbjct 67317 TCCTAATGTGTTTGTAGCCAGCAAGTTAGAACGGGTGGTGTACGCCTCGTGGTCCAGAGT 67258 Query 107930 GCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTT 107989 ||| || || |||||||| ||| | || |||| || |||| |||| |||| | Sbjct 67257 GCAGGCAGATCTGAACTGCATGAAGGATCTGCTGCACTCTCCAGTCAACTGGAGGTACCT 67198 Query 107990 ACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCT 108049 ||||| || |||||||||||||||||||| || || |||| |||||||| || || Sbjct 67197 GCTGAACACCTGCGGGACAGACTTCCCCATCAAAACAAATGGAGAGATGGTAAAAGCACT 67138 Query 108050 CAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaa 108109 ||| | || || |||||||| |||||| ||| || | ||||| ||| |||| Sbjct 67137 GAAGGCCCTCAATGGAAAGAACAGCATGGAGAGTGAAGTCACCAGTGAGTACAAGAAAAC 67078 Query 108110 TCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGA 108169 |||||| | | | || | || || || || | | | || | || | | Sbjct 67077 CCGCTGGCAGTTTCATTACAACGTCACTGATGGCCT---CACAAACACATACGTGCACAA 67021 Query 108170 CCCTCCCC--CTGAT-AATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCG 108226 ||||||| | || | ||||||||| | || |||||||| ||||||| | | | Sbjct 67020 ACCTCCCCCGCCCATCAGCAGCCCCATGTTCTCTGGAAATGCCTACTTTGTGGTCACAAG 66961 Query 108227 AGCCTTTGTCCAACATGTCTTAGACAAC-CCTAAATCCCAAAGACTGGTTGAATGGGTCA 108285 ||||||||| | || || | || || | || | |||| | | || |||| | Sbjct 66960 AGCCTTTGTGAAGCACGTGATGGAGGACGGAGAGATTCAAAAG-TTTCTGGAGTGGGAGA 66902 Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGC 108345 | ||||| || ||||| || || ||||| ||||||||| | ||| | ||| | | | Sbjct 66901 AGGACACGTACAGCCCTGATGAGCACCTGTGGGCCACCTTGCAGAGGATTCCTTCAGTTC 66842 Query 108346 CTGGCTCTGTTCCTAGCCA-CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGG 108404 | || ||||| ||| |||| | ||||||| |||||||||||||| ||| ||||| | Sbjct 66841 CCGGATCTGTGCCT-GCCAGCGACAAGTATGACATCTCAGACATGCAGGCCCTCGCCCGC 66783 Query 108405 CTCGTCAAGTGGCAGTACCACGAGGGAGATGT-CAGCATGGGGGCGCCTTATGCACCCTG 108463 | ||||||||| || || |||||| | || | || | | ||| | | || || Sbjct 66782 GTGGTCAAGTGGAGCTATTTAGAAGGAGATATGCAAAAAGGAGCCCCCTACTAC-CCGTG 66724 Query 108464 CTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCT 108523 | || || || | || ||| | ||| | || || | |||||| | ||||| | || Sbjct 66723 TACCGGTATTCACAGAAGAGCCGTGTGCGTGTATGGAGTTGGGGACATCAACTGGGTCCT 66664 Query 108524 CCAG--AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATA 108573 || |||| |||||| |||| ||||||||||| || ||| ||||||| Sbjct 66663 -GAGTCAACC-TCACCTGCTGGCCAACAAGTTTGATCCTGAGGTTGATGATA 66614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348244105347732