Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq755 105 1e-17 >seq755 Length=318311 Score = 105 bits (116), Expect = 1e-17 Identities = 391/611 (64%), Gaps = 5/611 (1%) Strand=Plus/Minus Query 248799 CTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCT 248858 || || || |||||| ||| | ||||| | ||||| || |||||| || ||||| Sbjct 111382 CTTCGACAGAGATTTCTCCTACAACTTCTTCGGCTTCAAGACTCTGGAGCGCTCCTATCT 111323 Query 248859 CCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGT 248918 | || || | ||||| | | || || ||||||||| | ||| | ||| | || Sbjct 111322 GTTGAAGATCAACGGCAAAGTGGCCGAGCGTCCGCAGCACATGCTCATGAGGGTGTCCGT 111263 Query 248919 CGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACG 248978 || || ||||| ||||| || | ||||||| |||| | || || Sbjct 111262 AGGAATCCACAAAACGGACATCGATGCAGCCATCGAGACCTACAACCTGCTGTCGGAGAA 111203 Query 248979 CTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAG 249038 ||| | || || ||| | ||||| ||||||||||| || ||| || |||||| Sbjct 111202 GTGGTTCACCCACGCCTCCCCGACTCTCTTCAACGCTGGAACCAACAGGCCACAGCTGTC 111143 Query 249039 CTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA 249098 | ||||| || || |||||| |||||||| |||| ||||| |||||||| || || Sbjct 111142 CAGCTGCTTCCTGCTCGCCATGAAAGACGACAGCATCGAAGGCATCTATGACACTCTGAA 111083 Query 249099 ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCG 249158 ||| || || || || | || || || |||||| | | ||| | |||| | Sbjct 111082 GCAGTGTGCCCTCATCTCCAAGTCGGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAG 111023 Query 249159 AGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCT 249218 | | | || |||||| ||||| ||||| | | || |||| ||| | || Sbjct 111022 ATCCACAGGAAGCTACATCTCTGGTACCAATGGCAACTCCAACGGGCTCGTCCCCATGCT 110963 Query 249219 TCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG----GGGT 249274 || | | ||| || | | | || |||||| ||| | | || || Sbjct 110962 GAGAGTTTACAACAACACGGCGCGTTACGTCGACCAGG-GTGGCAACAAGAGACCCGGAG 110904 Query 249275 CGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAA 249334 | ||||||||||| ||||| ||||||| || | || || ||||| || |||| | Sbjct 110903 CCTTCGCCATGTACTTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTCGAGCTGAAGA 110844 Query 249335 AGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCG 249394 |||||| || || ||| ||| || | ||||| ||||||| ||| ||| || ||| Sbjct 110843 AGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCCTTTGGATCCCCG 110784 Query 249395 ACTTGTTCATG 249405 | |||||||| Sbjct 110783 ATCTGTTCATG 110773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073686358097024