Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq755 527 6e-145 seq1980 138 1e-27 seq1721 107 2e-18 >seq755 Length=318311 Score = 527 bits (584), Expect = 6e-145 Identities = 1070/1585 (68%), Gaps = 21/1585 (1%) Strand=Plus/Plus Query 22409 TCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAAC 22468 |||||||||| || | | |||| ||||||| ||| || |||| || | |||||| Sbjct 109832 TCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAAC 109891 Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528 |||||||||| || | ||| ||| |||||| ||| | | |||| || || ||| Sbjct 109892 TCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTG 109951 Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588 || ||||| ||||| ||||| || || || |||||||| |||| ||| || ||| ||| Sbjct 109952 TTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTC 110011 Query 22589 AAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTC 22648 | ||||| || | || || ||| |||| | |||||||||||| |||| ||||||| Sbjct 110012 ACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTC 110071 Query 22649 ACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTT 22708 || |||||||| ||||| |||| | ||| || | ||| ||| |||||||| Sbjct 110072 ---TTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTC 110128 Query 22709 TCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATA 22768 ||||| || || | || || || |||||||||||||||| || |||| || || Sbjct 110129 TCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATG 110188 Query 22769 GTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGC--GACGCTTTCGTACGGCATACGCA 22826 ||||||||||| | |||| | | || | | | | |||||| |||| ||||| Sbjct 110189 GTCTCGAAGATGTGGATGTTGAG--CAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCA 110246 Query 22827 TCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGAT 22886 | | | ||| ||||| || | ||| || || || || |||||||| | || | | Sbjct 110247 TGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGT 110306 Query 22887 TCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTC 22946 | || | || || |||| || || | || ||||| | |||||| |||| Sbjct 110307 TGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTT 110366 Query 22947 TGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT--GTAC 23004 || | | ||| || | | |||||| ||| | ||| | | Sbjct 110367 TGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTC--AAAAGTCCGCTCCGGGGT 110424 Query 23005 AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGT 23064 || || |||||| |||||| ||||| ||||| || || || |||||||| | | || Sbjct 110425 GACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGT 110484 Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124 ||| || || ||||| || || || ||||| ||||| || ||||||| ||| |||||| Sbjct 110485 GTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTT 110544 Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184 ||| || | ||||| | || ||||| |||||||||||||| |||||||| |||||| Sbjct 110545 GCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGA 110604 Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTC 23244 ||||||||| || ||||| |||||| | || ||| | ||| ||||| | Sbjct 110605 CTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCCTTCCTT 110664 Query 23245 CTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGA 23304 ||| ||| | ||| | | | ||||| || | || | || ||| |||| || || | Sbjct 110665 CTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACA 110724 Query 23305 TTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATC 23364 | |||||||| ||| ||| || | || || | |||| || ||||| Sbjct 110725 GGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATC 110784 Query 23365 CGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTT 23424 || ||||| || |||||||| || || | ||| | | |||||| || || |||||||| Sbjct 110785 GGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTT 110844 Query 23425 TTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGC 23484 |||| || | ||||| |||||||| ||||||||||| | ||| | ||| || || Sbjct 110845 CTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGC 110904 Query 23485 GCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAG 23544 || |||||||| ||||| ||||| ||||||||||| |||||||||||||| ||||| || Sbjct 110905 TCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAG 110964 Query 23545 CATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCG 23604 ||| || ||||| |||||||| ||| | ||| | | | ||| | | Sbjct 110965 CATGGGGACGAGCCCGTTGGAGTTGCC----ATTGGTACCAGAGATGTAGCTTCCTGTGG 111020 Query 23605 AAC-GTTG----TGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 | | | || ||| || | ||| |||||||| |||| || || || | || || Sbjct 111021 ATCTGATGCAGCTGACCG-CCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACAC 111079 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 || ||||||||||| |||||||| ||||||||||| ||||| | |||| || ||| || Sbjct 111080 TGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAG 111139 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 |||| || | || || | || ||| || |||||| |||||| || || Sbjct 111140 CTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC 111199 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 | | ||||| || ||||| || |||||||| ||||| |||||| | ||| || Sbjct 111200 CACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATT 111259 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTG 23899 || | || || | ||| | ||||| || || | |||| || |||||| || || Sbjct 111260 CCTACGGACACCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTC 111319 Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCG 23959 |||||||| || || | || || || || || || ||| ||| || || | ||| Sbjct 111320 AACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCG 111379 Query 23960 TGCACTATGGCCGAATTCAAACGGT 23984 | ||||||||| || | |||| Sbjct 111380 AAGATTATGGCCGAGTTGAGGCGGT 111404 >seq1980 Length=102293 Score = 138 bits (152), Expect = 1e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||||||||||| ||||||| ||||| || ||||| || || ||||||| || | ||| | Sbjct 5934 TTTCAACGCGTTTCATAAAGAGATCTGGGATCCACAGGGCAAAGAACAGGTCTCTGGCTC 5993 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | ||| ||||| ||||||||||| ||||| ||||||||||| ||||| || ||||| Sbjct 5994 TCTGCTCTTCTTTACCGGTGTTCTTCTTCAACTCCAAAAAGTCAAACACATCAAAATGCC 6053 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 | ||||| ||||| || || || || || ||||||| Sbjct 6054 ATGGCTCCAGGTACACAGCGAAGGCCCCAGGTCTCT 6089 Score = 105 bits (116), Expect = 6e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| |||||| ||||||||||| || || || || |||||||| | || || || Sbjct 5456 CACCTCATCTTTGCTGGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGT 5515 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| ||| ||||||||| || | ||||| | ||||| ||||||||||| || || Sbjct 5516 GCCCAGATTTTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGT 5575 Query 23167 GCCCGTCTCGACCTGCGACTCGATGA 23192 || || || ||| |||||||||| Sbjct 5576 CCCGGTTTCTGTCTGTGACTCGATGA 5601 >seq1721 Length=144067 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||||||||| || || || || || || || ||||| || |||||| |||| || || | Sbjct 117923 CAAACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGC 117982 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | |||| |||| | ||||| | ||| ||||||||||||| | || || | Sbjct 117983 CCAGTGACACCATCGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTG 118042 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||| | | || ||||||||||| ||| ||||||| || | ||| | Sbjct 118043 ACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACT 118102 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| || || || || || || || || || || | ||||||||||||| Sbjct 118103 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGCGGTA 118156 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || || || || Sbjct 118156 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 118215 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||| ||| | || || |||||| Sbjct 118216 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAG 118275 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || |||||||| ||| |||| || || | || || ||| Sbjct 118276 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118335 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| || || || || || || | ||||||||||||| Sbjct 118336 ATCCAAAAAGAATCCACCCTCCACCTTGTGCTGCGTCTGAGGGGCGGTA 118384 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || |||||| | || ||||| || | Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||| | || || |||||| Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||||||||| ||| |||| || || | || || ||| Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || || || ||||| || || || || | |||||||| ||| Sbjct 118564 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGT 118611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445733981638560