Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq35 95.1 1e-14 >seq35 Length=1322159 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || || || || || || ||||| || | || | || ||||||| |||| || ||| Sbjct 415121 TCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCTTT 415180 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||| | || ||||||||||||||||| ||||| || ||||||||||||||||| || Sbjct 415181 AGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACAGCTGCAAAAGCC 415240 Query 11774 AC 11775 || Sbjct 415241 AC 415242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468490726533920