Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq755 508 8e-139 seq1980 91.5 2e-13 seq133 84.2 3e-11 >seq755 Length=318311 Score = 508 bits (562), Expect = 8e-139 Identities = 1313/1991 (66%), Gaps = 21/1991 (1%) Strand=Plus/Plus Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146 ||| ||||||||| | || || | | ||||| ||||| || ||||| | || Sbjct 109789 CTGGATGGATCCATTGTGAGCGATGAGCTGGTTCTTCATCTCCTCGTTCCACAGCCCCCT 109848 Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206 ||| || | || | || || || || || || | ||||| || || |||| || || Sbjct 109849 CTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCT 109908 Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266 || ||||| || || ||||| || | || | ||||| || || |||| || || || Sbjct 109909 GCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGC 109968 Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326 || || || || ||||| || |||| || | || || || | |||| | | ||| Sbjct 109969 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGAT 110028 Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 65386 || || || || | | ||| | ||| || || | ||| | | Sbjct 110029 CTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGG--CGTCTTCTCCCACATGTCG 110086 Query 65387 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 65444 | || || || || || ||| | || || | || || ||||| || || || Sbjct 110087 TACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCG 110146 Query 65445 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 65504 | || || || || |||||||| | ||| |||| || ||||| |||||||| | | Sbjct 110147 GCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATG 110206 Query 65505 TTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 65564 || || || || || |||| ||||| || | | | ||| || || ||||||||| Sbjct 110207 TTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCT 110266 Query 65565 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 65624 || ||||| || || || ||||| || || || | ||| || || | |||||||| || Sbjct 110267 AAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGC 110326 Query 65625 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 65684 | || || || || || || ||||| || || || ||| |||| ||||||||| ||| Sbjct 110327 ACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACA 110386 Query 65685 TCCTTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACA 65741 | | |||||| ||| ||||| ||||| | || ||||||| | || | Sbjct 110387 TACGCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGGGTGACGTACATGTTGAGGGCGATG 110446 Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 || ||||||||||| || |||||||| | | | |||| | || || ||||| Sbjct 110447 GAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAG 110506 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 || || || ||||||||||| || | ||| || || || ||||| |||| || || || Sbjct 110507 AGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCT 110566 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 65920 || || || ||| | || ||||| || || |||| || || || || || | ||| | | Sbjct 110567 TTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGC 110626 Query 65921 GACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGTGTATACAAT 65978 || ||||||| | | | ||| ||| ||| | || || | ||||| | Sbjct 110627 TGCT-GAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTC 110685 Query 65979 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAAC 66038 | || ||||| || ||||| | ||||| ||||||||| | | |||||||||| Sbjct 110686 C--TCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGA 110743 Query 66039 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TAT 66097 ||||| || || || ||| | ||||| || ||||| || |||||||| || || Sbjct 110744 GACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAG 110803 Query 66098 AAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 66157 ||| | ||||||| || || ||||| |||||||| ||||| || || |||||||| | Sbjct 110804 AAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTC 110862 Query 66158 CATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 66217 | | ||| | |||||||| |||||||| ||||| | |||| || | ||||| || Sbjct 110863 GAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCC 110922 Query 66218 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 66277 ||||| || | ||| | || ||||| || |||||||||| ||| || | | || || Sbjct 110923 ACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTT 110982 Query 66278 GGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAG 66337 ||| | |||||||| || ||||| |||||||| | | | || || | | | Sbjct 110983 GGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCAC 111042 Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397 ||| || || || ||| || ||||| | || || | || | || ||||||||||| Sbjct 111043 ACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCC 111102 Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 66457 || || || || || ||||| || || || ||||| |||| || | | | || Sbjct 111103 TTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 111162 Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 66517 ||| || || || | || || || ||||| || ||||| || || || || || ||||| Sbjct 111163 TCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 111222 Query 66518 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 66577 ||||| || |||| || || ||| || || |||||||| | || | ||| | ||| Sbjct 111223 GGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCAT 111282 Query 66578 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 66637 |||||| || | || | | ||| ||| || ||||||| ||||| |||| ||| Sbjct 111283 GTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGT 111342 Query 66638 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 66697 || || || || ||||||| || || |||| ||| | || || |||||||||| Sbjct 111343 CTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCGAAGATTATGGCCGAGTTGAGGCG 111402 Query 66698 ATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCC 66757 || || | | ||| | || | || |||| || || || || || | Sbjct 111403 GTCTTTGTTCTCAAGAACAATGTCGAGCGTCTCCTTTGAGATCATGGGGGA--GTGGCGT 111460 Query 66758 ATTTTTA--GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 66815 | || | || ||||| |||||| | | |||||||| || || || || | ||| || Sbjct 111461 TTGTTCAAGGGGTTGACGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACTTTCTTG 111520 Query 66816 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875 || || ||||| || || || || || || | ||| || | ||||| || || || ||| Sbjct 111521 GTCTCCTTGTGCAGGTTAGAGACAGCGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGT 111580 Query 66876 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACT 66935 | || || |||||| || || || || |||| ||||| | || || || || ||| Sbjct 111581 TTAGTTGTGAGAGTGGCAGCGATCTCTGCAGCCAACGTGTCGAGCTCCACAGTGGTGACT 111640 Query 66936 CCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTG 66995 || | || | || ||||| |||||||| | || | || || | | |||| | Sbjct 111641 CCGCTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCCGGGTCCACAAAGTCAGAG 111700 Query 66996 TTTAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGACATTTTC 67054 || | || || || || |||| || ||||| |||||||| || |||||||| ||| Sbjct 111701 TTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGCGTTC 111759 Query 67055 CTTGTATCCAT 67065 || | ||||| Sbjct 111760 CTGGCGTCCAT 111770 >seq1980 Length=102293 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515 || || || || || | |||||||| || || || ||||| || || || || | ||| Sbjct 6658 GTGCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCTGACAGCAAGTTG 6717 Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575 || || ||||| ||||| || || || | || ||||||||| ||||| || | ||| | | Sbjct 6718 TAGGTGTCAATGGCTGAATCAATGTCTCCTTTATGAATTCCAACTGCCACTCTCATCAGC 6777 Query 66576 ATGTGCTGAGGTCTTTCA 66593 ||||||||||| || ||| Sbjct 6778 ATGTGCTGAGGCCTCTCA 6795 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| || || || ||||| || || |||||| || | || || ||||||||||||| Sbjct 3987 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCTATATGGATAT 4046 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 | | || || || || || ||| |||| || | ||||| ||||| || | | ||||| Sbjct 4047 TAAGGGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCTGCCATCTTGAGAACCGTCT 4106 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074 | || | |||||||| | |||||||| | |||| | ||| || || Sbjct 4107 TCTGGGAGATTTCCCACACTGTTTTATAGAGCTGCTTCAGATCATCAGG 4155 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| || || |||||||| || || || || || | | || || | | Sbjct 7740 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCCACCCGCGCAGCCAGGA 7799 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | || || || ||||||| || || ||||| || | || |||||||||||||||| Sbjct 7800 TTGCGTAGTCAGGATGTTTAGTGGTGAGCGTGGCAGCAGTCTCCGCTGCCAGAGTGTCCA 7859 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || |||||| | || | || ||||| |||||||| Sbjct 7860 GTTCCACGGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 7905 >seq133 Length=897885 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 9264 TGCAAGAACAGATTGATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCA 9323 |||| ||| || |||| || || | ||||| ||||||||||| || | | || ||| Sbjct 859404 TGCAGGAAGAGGTTGACAATGTCAAGGTAGAGGTTGATAGAGGCCAAGATGTGCTCCTCA 859463 Query 9324 GGCGAGAGCTTATGTATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGG 9383 || ||||||| | || || | || || ||||||||||| |||||||| || || Sbjct 859464 GGTGAGAGCTGCTTCATCAGCAGGCTGGTATCGTAGATAATGAAGCCGCAGAAGACCAGA 859523 Query 9384 GCCCCAAAAGCAGACAGGACCAGCTC 9409 |||||| ||||||| |||||||| Sbjct 859524 GCCCCAGCTCCAGACAGAACCAGCTC 859549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658124934383120