Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq766 147 2e-30 >seq766 Length=322945 Score = 147 bits (162), Expect = 2e-30 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 91811 TTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAG 91869 || ||| |||| ||||||| ||| ||||||| ||||| | | | ||| || || | | Sbjct 158327 TTCTCCAGCAAGGAGGACTGCAAGATCATCACCGACACAG-CGGCCAAGCTCGAGCGCTG 158269 Query 91870 TGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGC 91929 |||||||||||||| ||| | ||||| ||||| || || || |||||| | || | | Sbjct 158268 CGGCTTCTACTGGGGCCCTCTTGGGGTGGAGGACGCCCACCGCATGCTGAGGGACGCACC 158209 Query 91930 ACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTA 91989 ||||||||||| ||||| || || ||| | || ||||||||||| ||||||||||| || Sbjct 158208 CCTGGGCAGCTTCCTCATCCGAGACAGCCGCCAGAAGGACGTCTTCTTCACGCTGTCCTA 158149 Query 91990 TCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 ||| | || ||| || ||||| ||| | || || |||||| Sbjct 158148 CCACGCCAAGAGCGGGCCGGTCAGCGTGCGCATCGACTACAAG 158106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356208340588654