Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq755 535 6e-147 seq1980 91.5 2e-13 >seq755 Length=318311 Score = 535 bits (592), Expect = 6e-147 Identities = 1326/1992 (67%), Gaps = 23/1992 (1%) Strand=Plus/Plus Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025 ||| ||||||||| | || || | | ||||| ||||| || ||||| | || Sbjct 109789 CTGGATGGATCCATTGTGAGCGATGAGCTGGTTCTTCATCTCCTCGTTCCACAGCCCCCT 109848 Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085 ||| || | || | || || || || || || | ||||| || || |||| || || Sbjct 109849 CTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCT 109908 Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145 || ||||| || || ||||| || | || | || || || || |||| || || || Sbjct 109909 GCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGC 109968 Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205 || || || || ||||| || |||| || | || || || | |||| | ||| Sbjct 109969 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGAT 110028 Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCA 79263 || || || || || |||| | ||||| || || | ||| | | | | ||| | || Sbjct 110029 CTTCTCCTTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTC-TCCCACATGTCG 110086 Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323 || || || || || || || | || || ||| || || || || || || Sbjct 110087 TACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCG 110146 Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 | || | || || |||||||| | || |||| || ||||| ||||| || | | Sbjct 110147 GCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATG 110206 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443 ||||| || || || |||| ||||| || | | | ||| || || ||||||||| Sbjct 110207 TTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCT 110266 Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503 || ||||| || || || ||||| || || || | ||| || ||| | |||||||| || Sbjct 110267 AAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGC 110326 Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563 | || || || || || || ||||| || || || || |||| ||||||||| ||| Sbjct 110327 ACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACA 110386 Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCCA-TCTA---TTACAAACATGTTCAACGCGAC 79619 | | ||||| ||| ||||| |||| || | || ||||||| | |||| Sbjct 110387 TACGCCAGTTTTTTAAAGTCAAAA-GTCCGCTCCGGGGTGACGTACATGTTGAGGGCGAT 110445 Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 || ||||||||||| || |||||||| | | | |||| | ||||| ||||| Sbjct 110446 GGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCA 110505 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 |||||| || ||||| ||||| || | ||| || || || ||||| |||| || || || Sbjct 110506 GAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTC 110565 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA- 79798 || || || ||| |||| ||||| || || |||| || || || || || | ||| | Sbjct 110566 TTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAG 110625 Query 79799 CGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTA--TTGTGTATATAA 79856 | || ||||||| | | | |||| ||| ||| | || || | ||||| | Sbjct 110626 CTGCT-GAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCT 110684 Query 79857 TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAA 79916 | || ||||| || ||||| ||||| | ||||||||| ||| |||||||||| Sbjct 110685 CC--TCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAG 110742 Query 79917 CGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TA 79975 ||||| || | || || | ||||| || ||||| || |||||||| || || Sbjct 110743 AGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTA 110802 Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035 ||| || ||||||| || |||||||| |||||||| ||||| || || |||||||| Sbjct 110803 GAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGT 110861 Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095 | | | ||| | |||||||| |||||||| ||||| | |||| |||| ||||| | Sbjct 110862 CGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGC 110921 Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155 | ||||| || | ||| | || ||||| || |||||||||| ||| || | | || | Sbjct 110922 CACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGT 110981 Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATA 80215 |||| | |||||||| || ||||| |||||||| ||| | || || | | | Sbjct 110982 TGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCA 111041 Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275 ||| || || || ||| || ||||| | || || | || | || |||||||||| Sbjct 111042 CACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGC 111101 Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 80335 | || ||||| || || ||||| || || || ||||| |||| || | | | | Sbjct 111102 CTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGG 111161 Query 80336 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 80395 |||| || || || | || || || ||||| || ||||| || || ||||| || |||| Sbjct 111162 TTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGT 111221 Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACA 80455 | ||||| || |||| || || ||| || || |||||||| | || | ||| | || Sbjct 111222 AGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCA 111281 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAG 80515 ||||||| || | || | | ||| || || ||||||| || || |||| || Sbjct 111282 TGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAG 111341 Query 80516 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 80575 | || || || || ||||||| || || |||| ||| | || || |||||||||| Sbjct 111342 TCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCGAAGATTATGGCCGAGTTGAGGC 111401 Query 80576 TATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCC 80635 || || | | ||| | || | || |||| || || || || || | Sbjct 111402 GGTCTTTGTTCTCAAGAACAATGTCGAGCGTCTCCTTTGAGATCATGGGGGA--GTGGCG 111459 Query 80636 CATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 80693 | || | || || || |||||| | | |||||||| || || || || | ||| || Sbjct 111460 TTTGTTCAAGGGGTTGACGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACTTTCTT 111519 Query 80694 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || |||||||| || || || || || || | || || | ||||| || || || || Sbjct 111520 GGTCTCCTTGTGCAGGTTAGAGACAGCGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTG 111579 Query 80754 TTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 80813 || || || |||||| || || || || |||| ||||| | || || || || || Sbjct 111580 TTTAGTTGTGAGAGTGGCAGCGATCTCTGCAGCCAACGTGTCGAGCTCCACAGTGGTGAC 111639 Query 80814 TCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 80873 ||| | || | || ||||| |||||||| | || | || || | | |||| Sbjct 111640 TCCGCTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCCGGGTCCACAAAGTCAGA 111699 Query 80874 GTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGACATTTT 80932 ||| | || || || || |||| || ||||| |||||||| || |||||||| || Sbjct 111700 GTTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGCGTT 111758 Query 80933 CCTTGTATCCAT 80944 ||| | ||||| Sbjct 111759 CCTGGCGTCCAT 111770 >seq1980 Length=102293 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || || || || | |||||||| || || || ||||| || || ||||| | ||| Sbjct 6658 GTGCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCTGACAGCAAGTTG 6717 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || ||||| ||||| || || || | || ||||||||| || || || | ||| | | Sbjct 6718 TAGGTGTCAATGGCTGAATCAATGTCTCCTTTATGAATTCCAACTGCCACTCTCATCAGC 6777 Query 80455 ATGTGCTGAGGTCTTTCA 80472 ||||||||||| || ||| Sbjct 6778 ATGTGCTGAGGCCTCTCA 6795 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || ||||| ||||| || || |||||| || | || || ||||||||||||| Sbjct 3987 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCTATATGGATAT 4046 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | || || || || || ||| |||| || | ||||| ||||| || | | ||||| Sbjct 4047 TAAGGGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCTGCCATCTTGAGAACCGTCT 4106 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953 | || | |||||||| | |||||||| | |||| | ||| || || Sbjct 4107 TCTGGGAGATTTCCCACACTGTTTTATAGAGCTGCTTCAGATCATCAGG 4155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718216563901520