Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq755 511 6e-140
seq1980 84.2 3e-11
>seq755
Length=318311
Score = 511 bits (566), Expect = 6e-140
Identities = 1102/1630 (68%), Gaps = 21/1630 (1%)
Strand=Plus/Plus
Query 71410 GCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTG 71469
|| || || || |||||||| | || | || || ||||| ||||| || | | |||
Sbjct 110150 GCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTG 110209
Query 71470 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 71529
|| || || || ||||| ||||| || | | | ||| || || |||||||||||
Sbjct 110210 AGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAA 110269
Query 71530 CCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 71589
||||| || || || ||||| || ||||| | ||| || ||| | |||||||| || |
Sbjct 110270 CCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACT 110329
Query 71590 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCC 71649
|| || || || || || ||||| || || || ||| |||| ||||||||| |||| |
Sbjct 110330 GGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATAC 110389
Query 71650 TTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGAT 71706
||||| ||| ||||| ||| || | || ||| ||| | ||| | ||
Sbjct 110390 GCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGGGTGACGTACATGTTGAGGGCGATGGAG 110449
Query 71707 GCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGA 71766
||||||||||| || |||||||| | | || |||| | ||||| ||||| ||
Sbjct 110450 GCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGG 110509
Query 71767 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 71826
|| || ||||||||||| || | ||| || || || ||||| |||| || || || ||
Sbjct 110510 TTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTG 110569
Query 71827 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGAC 71885
|| || || |||| ||||| || || |||| || || || || || | ||| | | |
Sbjct 110570 TACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGC 110629
Query 71886 TCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA--TTGTGTATATAATCGT 71943
| ||||||| | | | |||| ||| ||| | || || | ||||| | |
Sbjct 110630 T-GAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCC-- 110686
Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002
|| ||||| || ||||| ||| | ||| | ||||||||| | || |||||||||| ||
Sbjct 110687 TCAAACTCCTCCCCCCA-GCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGA 110745
Query 72003 CCACTC-TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATA 72060
||| || | | || | || | ||||| || ||||| || |||||||| || || |
Sbjct 110746 CCAGTCCTGGTTGCTC-TCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGA 110804
Query 72061 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 72120
|| || ||||||| || |||||||| |||||||| ||||| || || |||||||| |
Sbjct 110805 AA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCG 110863
Query 72121 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCT 72180
| | ||| | |||||||| |||||||| ||||| | |||| || | ||||| ||
Sbjct 110864 AACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCA 110923
Query 72181 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 72240
||||| || | ||| | || ||||| || |||||||||| ||| || | | || |||
Sbjct 110924 CCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTG 110983
Query 72241 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGA 72300
|| |||||||| || ||||| |||||||| ||| | || ||| | | | |
Sbjct 110984 GAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCACA 111043
Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360
|| || || || ||| || ||||| | || || | || | || |||||||||||
Sbjct 111044 CCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCT 111103
Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420
|| || || || || ||||| || || || ||||| |||| || | | | |||
Sbjct 111104 TCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTT 111163
Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480
|| || || || | || || || ||||| || ||||| || || ||||| || |||||
Sbjct 111164 CCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAG 111223
Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATA 72540
||||| || |||| || || ||| || || |||||||| | || | ||| | |||
Sbjct 111224 GTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATG 111283
Query 72541 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 72600
||||| || | || | | ||| || || ||||||| ||||| |||| |||
Sbjct 111284 TGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGTC 111343
Query 72601 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTA 72660
|| || || || ||||||| || || |||| ||| | || || |||| |||||
Sbjct 111344 TTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCGAAGATTATGGCCGAGTTGAGGCGG 111403
Query 72661 TCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCA 72720
|| || | | ||| || || | || |||| || || || || || |
Sbjct 111404 TCTTTGTTCTCAAGAACAATGTCGAGCGTCTCCTTTGAGATCATGGGGGA--GTGGCGTT 111461
Query 72721 TTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 72778
| || | || || || |||||| | | |||||||| || || || || | ||| || |
Sbjct 111462 TGTTCAAGGGGTTGACGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACTTTCTTGG 111521
Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTT 72838
| |||||||| || || || || || || | || || || ||||| || || || ||||
Sbjct 111522 TCTCCTTGTGCAGGTTAGAGACAGCGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTT 111581
Query 72839 GTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 72898
|| || |||||| || || ||||| |||| ||||| | || || || || ||||
Sbjct 111582 TAGTTGTGAGAGTGGCAGCGATCTCTGCAGCCAACGTGTCGAGCTCCACAGTGGTGACTC 111641
Query 72899 CATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGT 72958
| | || | || ||||| |||||||| | || | || || | | |||| ||
Sbjct 111642 CGCTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCCGGGTCCACAAAGTCAGAGT 111701
Query 72959 TTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATAACATTTTCC 73017
| | || || || || |||| || ||||| |||||||| || ||||| || ||||
Sbjct 111702 TCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGCGTTCC 111760
Query 73018 CGGCATCCAT 73027
||| |||||
Sbjct 111761 TGGCGTCCAT 111770
>seq1980
Length=102293
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| || | ||| || || || ||||| || || || || || | | || || || |
Sbjct 7740 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCCACCCGCGCAGCCAGGA 7799
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
| || || || ||||||| || || ||||| || | || ||||||||||||||||
Sbjct 7800 TTGCGTAGTCAGGATGTTTAGTGGTGAGCGTGGCAGCAGTCTCCGCTGCCAGAGTGTCCA 7859
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
||| || || || |||||| | || | || ||||| ||||||||
Sbjct 7860 GTTCCACGGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 7905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671090391401680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |