Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq755 511 6e-140 seq1980 84.2 3e-11 >seq755 Length=318311 Score = 511 bits (566), Expect = 6e-140 Identities = 1102/1630 (68%), Gaps = 21/1630 (1%) Strand=Plus/Plus Query 71410 GCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTG 71469 || || || || |||||||| | || | || || ||||| ||||| || | | ||| Sbjct 110150 GCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTG 110209 Query 71470 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 71529 || || || || ||||| ||||| || | | | ||| || || ||||||||||| Sbjct 110210 AGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAA 110269 Query 71530 CCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 71589 ||||| || || || ||||| || ||||| | ||| || ||| | |||||||| || | Sbjct 110270 CCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACT 110329 Query 71590 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCC 71649 || || || || || || ||||| || || || ||| |||| ||||||||| |||| | Sbjct 110330 GGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATAC 110389 Query 71650 TTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGAT 71706 ||||| ||| ||||| ||| || | || ||| ||| | ||| | || Sbjct 110390 GCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGGGTGACGTACATGTTGAGGGCGATGGAG 110449 Query 71707 GCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGA 71766 ||||||||||| || |||||||| | | || |||| | ||||| ||||| || Sbjct 110450 GCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGG 110509 Query 71767 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 71826 || || ||||||||||| || | ||| || || || ||||| |||| || || || || Sbjct 110510 TTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTG 110569 Query 71827 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGAC 71885 || || || |||| ||||| || || |||| || || || || || | ||| | | | Sbjct 110570 TACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGC 110629 Query 71886 TCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA--TTGTGTATATAATCGT 71943 | ||||||| | | | |||| ||| ||| | || || | ||||| | | Sbjct 110630 T-GAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCC-- 110686 Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 || ||||| || ||||| ||| | ||| | ||||||||| | || |||||||||| || Sbjct 110687 TCAAACTCCTCCCCCCA-GCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGA 110745 Query 72003 CCACTC-TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATA 72060 ||| || | | || | || | ||||| || ||||| || |||||||| || || | Sbjct 110746 CCAGTCCTGGTTGCTC-TCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGA 110804 Query 72061 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 72120 || || ||||||| || |||||||| |||||||| ||||| || || |||||||| | Sbjct 110805 AA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCG 110863 Query 72121 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCT 72180 | | ||| | |||||||| |||||||| ||||| | |||| || | ||||| || Sbjct 110864 AACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCA 110923 Query 72181 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 72240 ||||| || | ||| | || ||||| || |||||||||| ||| || | | || ||| Sbjct 110924 CCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTG 110983 Query 72241 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGA 72300 || |||||||| || ||||| |||||||| ||| | || ||| | | | | Sbjct 110984 GAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCACA 111043 Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || || || || ||| || ||||| | || || | || | || ||||||||||| Sbjct 111044 CCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCT 111103 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || || || || || ||||| || || || ||||| |||| || | | | ||| Sbjct 111104 TCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTT 111163 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || || || || | || || || ||||| || ||||| || || ||||| || ||||| Sbjct 111164 CCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAG 111223 Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATA 72540 ||||| || |||| || || ||| || || |||||||| | || | ||| | ||| Sbjct 111224 GTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATG 111283 Query 72541 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 72600 ||||| || | || | | ||| || || ||||||| ||||| |||| ||| Sbjct 111284 TGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGTC 111343 Query 72601 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTA 72660 || || || || ||||||| || || |||| ||| | || || |||| ||||| Sbjct 111344 TTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCGAAGATTATGGCCGAGTTGAGGCGG 111403 Query 72661 TCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCA 72720 || || | | ||| || || | || |||| || || || || || | Sbjct 111404 TCTTTGTTCTCAAGAACAATGTCGAGCGTCTCCTTTGAGATCATGGGGGA--GTGGCGTT 111461 Query 72721 TTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 72778 | || | || || || |||||| | | |||||||| || || || || | ||| || | Sbjct 111462 TGTTCAAGGGGTTGACGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACTTTCTTGG 111521 Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTT 72838 | |||||||| || || || || || || | || || || ||||| || || || |||| Sbjct 111522 TCTCCTTGTGCAGGTTAGAGACAGCGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTT 111581 Query 72839 GTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 72898 || || |||||| || || ||||| |||| ||||| | || || || || |||| Sbjct 111582 TAGTTGTGAGAGTGGCAGCGATCTCTGCAGCCAACGTGTCGAGCTCCACAGTGGTGACTC 111641 Query 72899 CATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGT 72958 | | || | || ||||| |||||||| | || | || || | | |||| || Sbjct 111642 CGCTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCCGGGTCCACAAAGTCAGAGT 111701 Query 72959 TTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATAACATTTTCC 73017 | | || || || || |||| || ||||| |||||||| || ||||| || |||| Sbjct 111702 TCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGCGTTCC 111760 Query 73018 CGGCATCCAT 73027 ||| ||||| Sbjct 111761 TGGCGTCCAT 111770 >seq1980 Length=102293 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 |||| || | ||| || || || ||||| || || || || || | | || || || | Sbjct 7740 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCCACCCGCGCAGCCAGGA 7799 Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 | || || || ||||||| || || ||||| || | || |||||||||||||||| Sbjct 7800 TTGCGTAGTCAGGATGTTTAGTGGTGAGCGTGGCAGCAGTCTCCGCTGCCAGAGTGTCCA 7859 Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 ||| || || || |||||| | || | || ||||| |||||||| Sbjct 7860 GTTCCACGGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 7905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671090391401680