Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq755 132 7e-26 >seq755 Length=318311 Score = 132 bits (146), Expect = 7e-26 Identities = 346/527 (66%), Gaps = 22/527 (4%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || || |||||| ||| || || || || ||||| ||| | ||||| | | | || Sbjct 110997 ACCAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGT 110938 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||| ||||| || | || || || | ||| | |||||||| || ||| Sbjct 110937 TACGTCGACCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGTACTTGGAGCCGTGG 110878 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| ||||| || ||||| ||||| || || ||| | || || ||| | Sbjct 110877 CACTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGG 110818 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||| ||| | || || || || ||| | || ||| ||||||||||| | || | Sbjct 110817 GCCAGAGACCTTTTCTACGCCCTTTGGATCCCCGATCTGTTCATGAAGAGGGTGGAGAGC 110758 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||| | | ||||| || ||||| ||| || | | || || ||| ||| ||| Sbjct 110757 AACCAGG------ACTGGTCTCTGATGTGTCCCAACGCCTGTCCTGGACTGGACGAGTGC 110704 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCA-----AGAGGGCCGATACG 97155 ||||| || |||||||||| ||||| || ||| | ||||||| | || Sbjct 110703 TGGGGGGAGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGGCC-AAGCG 110645 Query 97156 TGAGACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTG 97215 || | || | || | | |||||| | |||||| | | | ||| ||||| | Sbjct 110644 TGTG----GTGAAGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACGG 110589 Query 97216 GAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGG 97275 | || |||||||| || ||||| || || || | || |||||||| | | ||| Sbjct 110588 GTACGCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 110529 Query 97276 GCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 ||||||||||| || ||| || ||||| ||||| || || ||| || Sbjct 110528 GCACCATCAAGTGCAGCAACCTCTGCACAGAAATCGTCGAATACACC 110482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741005306469680