Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq210 183 7e-41
seq86 93.3 1e-13
>seq210
Length=679747
Score = 183 bits (202), Expect = 7e-41
Identities = 181/234 (77%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || || ||||| | || || |||||||| || || ||||||
Sbjct 555762 ATGCCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 555703
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || |||||||| || |||||||| || ||||||
Sbjct 555702 GAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGA 555643
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || ||||| ||||| ||||||||||| ||||| |||| ||| ||||| || ||
Sbjct 555642 GGGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCC 555583
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| || || || ||||||||||| | || || ||||| |||||||| |||
Sbjct 555582 ACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATCTTG 555529
>seq86
Length=915686
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 78486 GAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCA 78545
|||| | |||||||||| | |||| || ||||| ||||| || || ||| | || ||||
Sbjct 258808 GAGCTCTGTGGTGGTATTTTGTCTCCAAGGGAATCGAATATCTGGACACTGTATTTTTCA 258749
Query 78546 TCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGT 78605
|||| | || ||||| || || ||| || || || || || || || | || ||||
Sbjct 258748 TCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCACCATGT 258689
Query 78606 TTACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAA 78649
| || | | ||||| || || |||||| | ||||||||||||
Sbjct 258688 TCACGCTCTGGTGGATTGGCATCAAATGGGTGGCAGGAGGACAA 258645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151312571165144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |