Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1310 118 7e-22
>seq1310
Length=240470
Score = 118 bits (130), Expect = 7e-22
Identities = 132/175 (75%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || |||| || ||| |||||||| |||||||| |||||||||||||| || ||
Sbjct 118499 AGTCCTGTAATGTGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAACGGC 118440
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || | ||||| || ||| || | |||||| ||||||||||| ||||| |||| |
Sbjct 118439 ACTCCCAGACCCATATCACCC-GAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACA 118381
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665
|||||| ||||| || | | || ||| || || ||||| || ||| || ||||
Sbjct 118380 CACGTAGAACTGGCAGAGAGCGTGGCAGGGCGGCAGAGCCATGAGGGGCAGGTCT 118326
Score = 102 bits (112), Expect = 6e-17
Identities = 141/194 (73%), Gaps = 10/194 (5%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||||| |||||||||| || || | |||||||||||| |||||||| || || |||||
Sbjct 116834 CATGTTTTTGTACTCTGCACCAAAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTC 116775
Query 25833 TCCATCTTCCCTGTGCTC---AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGC 25889
|| || || | |||| || || || ||||| ||||| | |||||| |||||
Sbjct 116774 GCCCTCCTCTC---GCTCTGTGAACCCGAGGTTGTCCAAGAAGTCCCGGGAACCGTTGGC 116718
Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGA--- 25945
|||||||| || || || ||||| || || | ||||| | || || ||||| |||
Sbjct 116717 ATCCCAGATTTTCACTCCTTTCTCTGACAGTTCCTTTGCATTTGTTGAACCCTGTGATGT 116658
Query 25946 CGAACCACAGCAGC 25959
|||| ||| ||||
Sbjct 116657 AGAACAACATCAGC 116644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340113481905714
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |