Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq570 132 7e-26 seq1056 131 2e-25 seq286 120 4e-22 >seq570 Length=446048 Score = 132 bits (146), Expect = 7e-26 Identities = 178/248 (72%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 8693 GGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCA 8752 ||||||| ||| |||| ||| || || || | ||| | | |||||||| Sbjct 92064 GGACACCACTTGGTGTTGAGACACACCAGCTTCTTCAAAGTGGACGTTTTGACGATGTTG 92005 Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || ||| ||||| |||||||||||||| |||||||| | |||||||||||| ||| Sbjct 92004 AAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTATTCAGGGGAGCAGATGGGGTTT 91945 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 || || || || ||||| || ||||| || | ||| | ||||||||||| || ||| Sbjct 91944 CCCTGCAGACCCTTCAGGGAGAAGGGAGCACCGATCTCCACCATGCTCTCACCAAATATG 91885 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 |||| || | ||| |||| || || |||| ||| ||||||| ||| || |||||| Sbjct 91884 CCGTTCAAGCGAGTCTTCTCCAGCATGATGCCGGGGTAAAACTCCAGAGCATCTATGTCT 91825 Query 8933 CCGTAAAG 8940 ||||| || Sbjct 91824 CCGTAGAG 91817 Score = 122 bits (134), Expect = 1e-22 Identities = 176/247 (71%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || |||||||||| |||||||| ||||| || || || ||| ||||| Sbjct 87027 TCACCAATGATGATGAGTCTGGTGGTCTGGAACAGCTGCTCATCGTCCCAGCTGGGATGC 86968 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || ||||| || || |||||||||||||| ||||| ||||| || || |||||||| Sbjct 86967 TCAGCCTTCAGGACGTCACACACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACATG 86908 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 |||| || |||| ||||| || |||| ||||||| ||||| ||| | | || Sbjct 86907 GTGAGGCCCGGCAGGAGGCCGAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGGG 86848 Query 9790 A---CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATT 9846 | |||| ||| || | ||||||||| | || || |||| ||||| ||||| Sbjct 86847 AAGGCTTC---AGGGTAAACCATGTGCACGGGCACCTCAGACACCGTTGGGGGGTACATC 86791 Query 9847 TCACCGT 9853 ||||||| Sbjct 86790 TCACCGT 86784 >seq1056 Length=264320 Score = 131 bits (144), Expect = 2e-25 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || | |||||| | ||||||||||| || |||||| ||| || || || Sbjct 41175 TCACCAATCAGGATGAGCCTTGTGGTCTGAAAGAGCCTTTCGTCGTCCCAGTCGGGGTGG 41116 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 | ||||| || |||||||| | ||||||||| | ||||||||| || ||||||||| Sbjct 41115 ACCTCCTTCAGCACGTCGCACACCCGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATC 41056 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 || ||||| || |||||||| || ||||| || |||||||| | || | ||| ||| Sbjct 41055 ATCAGACCGGGGACCAGGCCGAAGGCCTCGTGGCCGACAGCGAAGCGGTGAGATTCTGGC 40996 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849 || | ||||| ||| ||||| || || || || || | || || |||||||| Sbjct 40995 ACATGAGGAGGGTAGTGCATGTCGACACCCACGTCCTTTACTGTTGGTGGGTACATTTCT 40936 Query 9850 CCGTC 9854 || || Sbjct 40935 CCATC 40931 Score = 131 bits (144), Expect = 2e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 |||||||| || ||||||| || || ||||||||||| |||||||| |||| ||| Sbjct 42836 TTGACGATGTTGAAGCCCACGTTGCCTCCAAAGGTGCTGGGCTTCCAGTACTCCGGAGAG 42777 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 |||||| || |||| | ||| |||||||| || || ||||||| ||| | || || Sbjct 42776 CAGATGGGATTTCCCATTAAGCCCTTGAGGGAGAAAGGGGCCCCCATCTCCACCATCGTC 42717 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 || || ||||||||||| | | ||| || ||||||| | || | ||| | |||||| Sbjct 42716 TCCCCAAAGATGGCGTTCTGCCTGGGTTTCTCCACCAGCAGGCCCGGGTAGAGCTCCACG 42657 Query 8921 GCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || ||||||| ||||| | || || | || | ||||| ||||| |||| Sbjct 42656 GCATCGATGTGGCCGTACATCTCCTCAAGCACTGCGGACATTTCTTTTTCACCTG 42602 >seq286 Length=612266 Score = 120 bits (132), Expect = 4e-22 Identities = 186/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 8672 GGAACTCGGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATA 8731 ||||||| ||| || | | |||||| || ||| |||||| || || || Sbjct 498629 GGAACTCTGAAAGCCACATAAGGACACGTCCTGGTGTTCAGACAGACCAGCTTCTTGAGT 498570 Query 8732 GTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAA 8791 || ||| || || || |||| || || | || |||||||||||||| ||||||||| Sbjct 498569 GTGGCAGAGTTTACTATGTCAAAGCCGACTTTGCCTCCGAAGGTGCTGGGCTTCCAGTAA 498510 Query 8792 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCG 8851 | || ||||| || ||| ||| ||||||||||||||| || || || |||| ||| Sbjct 498509 TCTGGAGAGCATATAGGGTTTCCCAGGAGGCCTTTGAGGGAGAAGGGGGCGCCCATCTCC 498450 Query 8852 AGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTAC 8911 | ||||| || ||||| |||| || |||| || |||| || || |||| || Sbjct 498449 ACCATGCTTTCTCCGAATATGGACCCCGGTCGGGTTTTCTCCAACATCAAGCCGGGATAA 498390 Query 8912 AACTCCACAGCCTCGATGTCTCCGTA 8937 ||||| | ||| || ||||| ||||| Sbjct 498389 AACTCGAGAGCGTCAATGTCGCCGTA 498364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708473272533920