Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq570 132 7e-26
seq1056 131 2e-25
seq286 120 4e-22
>seq570
Length=446048
Score = 132 bits (146), Expect = 7e-26
Identities = 178/248 (72%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 8693 GGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCA 8752
||||||| ||| |||| ||| || || || | ||| | | ||||||||
Sbjct 92064 GGACACCACTTGGTGTTGAGACACACCAGCTTCTTCAAAGTGGACGTTTTGACGATGTTG 92005
Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812
|| ||| ||||| |||||||||||||| |||||||| | |||||||||||| |||
Sbjct 92004 AAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTATTCAGGGGAGCAGATGGGGTTT 91945
Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872
|| || || || ||||| || ||||| || | ||| | ||||||||||| || |||
Sbjct 91944 CCCTGCAGACCCTTCAGGGAGAAGGGAGCACCGATCTCCACCATGCTCTCACCAAATATG 91885
Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932
|||| || | ||| |||| || || |||| ||| ||||||| ||| || ||||||
Sbjct 91884 CCGTTCAAGCGAGTCTTCTCCAGCATGATGCCGGGGTAAAACTCCAGAGCATCTATGTCT 91825
Query 8933 CCGTAAAG 8940
||||| ||
Sbjct 91824 CCGTAGAG 91817
Score = 122 bits (134), Expect = 1e-22
Identities = 176/247 (71%), Gaps = 6/247 (2%)
Strand=Plus/Minus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || || |||||||||| |||||||| ||||| || || || ||| |||||
Sbjct 87027 TCACCAATGATGATGAGTCTGGTGGTCTGGAACAGCTGCTCATCGTCCCAGCTGGGATGC 86968
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
|| ||||| || || |||||||||||||| ||||| ||||| || || ||||||||
Sbjct 86967 TCAGCCTTCAGGACGTCACACACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACATG 86908
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
|||| || |||| ||||| || |||| ||||||| ||||| ||| | | ||
Sbjct 86907 GTGAGGCCCGGCAGGAGGCCGAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGGG 86848
Query 9790 A---CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATT 9846
| |||| ||| || | ||||||||| | || || |||| ||||| |||||
Sbjct 86847 AAGGCTTC---AGGGTAAACCATGTGCACGGGCACCTCAGACACCGTTGGGGGGTACATC 86791
Query 9847 TCACCGT 9853
|||||||
Sbjct 86790 TCACCGT 86784
>seq1056
Length=264320
Score = 131 bits (144), Expect = 2e-25
Identities = 176/245 (72%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || || | |||||| | ||||||||||| || |||||| ||| || || ||
Sbjct 41175 TCACCAATCAGGATGAGCCTTGTGGTCTGAAAGAGCCTTTCGTCGTCCCAGTCGGGGTGG 41116
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
| ||||| || |||||||| | ||||||||| | ||||||||| || |||||||||
Sbjct 41115 ACCTCCTTCAGCACGTCGCACACCCGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATC 41056
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
|| ||||| || |||||||| || ||||| || |||||||| | || | ||| |||
Sbjct 41055 ATCAGACCGGGGACCAGGCCGAAGGCCTCGTGGCCGACAGCGAAGCGGTGAGATTCTGGC 40996
Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849
|| | ||||| ||| ||||| || || || || || | || || ||||||||
Sbjct 40995 ACATGAGGAGGGTAGTGCATGTCGACACCCACGTCCTTTACTGTTGGTGGGTACATTTCT 40936
Query 9850 CCGTC 9854
|| ||
Sbjct 40935 CCATC 40931
Score = 131 bits (144), Expect = 2e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800
|||||||| || ||||||| || || ||||||||||| |||||||| |||| |||
Sbjct 42836 TTGACGATGTTGAAGCCCACGTTGCCTCCAAAGGTGCTGGGCTTCCAGTACTCCGGAGAG 42777
Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860
|||||| || |||| | ||| |||||||| || || ||||||| ||| | || ||
Sbjct 42776 CAGATGGGATTTCCCATTAAGCCCTTGAGGGAGAAAGGGGCCCCCATCTCCACCATCGTC 42717
Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920
|| || ||||||||||| | | ||| || ||||||| | || | ||| | ||||||
Sbjct 42716 TCCCCAAAGATGGCGTTCTGCCTGGGTTTCTCCACCAGCAGGCCCGGGTAGAGCTCCACG 42657
Query 8921 GCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975
|| ||||||| ||||| | || || | || | ||||| ||||| ||||
Sbjct 42656 GCATCGATGTGGCCGTACATCTCCTCAAGCACTGCGGACATTTCTTTTTCACCTG 42602
>seq286
Length=612266
Score = 120 bits (132), Expect = 4e-22
Identities = 186/266 (70%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 8672 GGAACTCGGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATA 8731
||||||| ||| || | | |||||| || ||| |||||| || || ||
Sbjct 498629 GGAACTCTGAAAGCCACATAAGGACACGTCCTGGTGTTCAGACAGACCAGCTTCTTGAGT 498570
Query 8732 GTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAA 8791
|| ||| || || || |||| || || | || |||||||||||||| |||||||||
Sbjct 498569 GTGGCAGAGTTTACTATGTCAAAGCCGACTTTGCCTCCGAAGGTGCTGGGCTTCCAGTAA 498510
Query 8792 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCG 8851
| || ||||| || ||| ||| ||||||||||||||| || || || |||| |||
Sbjct 498509 TCTGGAGAGCATATAGGGTTTCCCAGGAGGCCTTTGAGGGAGAAGGGGGCGCCCATCTCC 498450
Query 8852 AGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTAC 8911
| ||||| || ||||| |||| || |||| || |||| || || |||| ||
Sbjct 498449 ACCATGCTTTCTCCGAATATGGACCCCGGTCGGGTTTTCTCCAACATCAAGCCGGGATAA 498390
Query 8912 AACTCCACAGCCTCGATGTCTCCGTA 8937
||||| | ||| || ||||| |||||
Sbjct 498389 AACTCGAGAGCGTCAATGTCGCCGTA 498364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708473272533920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |