Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 87.8 2e-12
>seq1721
Length=144067
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/233 (69%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 26764 ACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822
||||| ||||| | ||||| ||||| | ||||| || | |||||| |||| | ||
Sbjct 117922 ACAAACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAG 117981
Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882
| | |||||||||||| | ||||| || || ||||| ||||| || || ||
Sbjct 117982 CCCAGTGACACCATCGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCT 118041
Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942
|| || || || | || | || ||||| || || ||||||| | | | || ||||
Sbjct 118042 GACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGAC 118101
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| || || || || || |||| || |||||| | || || || ||
Sbjct 118102 TACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGCGG 118154
Score = 82.4 bits (90), Expect = 7e-11
Identities = 163/240 (68%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || | |||||||| | |||||| | || | || | | |
Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | ||||| ||||| ||||| ||||| || || || || ||
Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | || ||||| || || || |||| | | | || ||||| |||
Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG-AAAAATATGATT 27007
|| || || || || ||| |||| || |||||| | || || || || || | ||||||
Sbjct 118564 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGTCAATAAATGATT 118623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478627589276960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |