Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1721 87.8 2e-12 >seq1721 Length=144067 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 26764 ACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 ||||| ||||| | ||||| ||||| | ||||| || | |||||| |||| | || Sbjct 117922 ACAAACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAG 117981 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 | | |||||||||||| | ||||| || || ||||| ||||| || || || Sbjct 117982 CCCAGTGACACCATCGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCT 118041 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 || || || || | || | || ||||| || || ||||||| | | | || |||| Sbjct 118042 GACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGAC 118101 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || || || || || |||| || |||||| | || || || || Sbjct 118102 TACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGCGG 118154 Score = 82.4 bits (90), Expect = 7e-11 Identities = 163/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | |||||||| | |||||| | || | || | | | Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||||| || || || |||| | | | || ||||| ||| Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG-AAAAATATGATT 27007 || || || || || ||| |||| || |||||| | || || || || || | |||||| Sbjct 118564 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGTCAATAAATGATT 118623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478627589276960