Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq755 279 5e-70 seq1721 127 2e-24 seq1980 120 3e-22 >seq755 Length=318311 Score = 279 bits (308), Expect = 5e-70 Identities = 976/1507 (65%), Gaps = 40/1507 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||| |||||||||||||| || || | || || | ||| ||| ||| Sbjct 109877 TTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 109936 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | |||||||| || |||||||| || ||||| | || |||||||| |||| | Sbjct 109937 TCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 109996 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || | || ||||| || ||| | ||||| ||| ||| ||||| Sbjct 109997 AGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 110056 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || |||||| || ||||||||||||||||||| ||||||| |||| | ||| | Sbjct 110057 AGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAG 110116 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | | ||| ||| | || |||||||| |||||||||||||| Sbjct 110117 CCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCA 110176 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || | || || |||||| || || ||||||||||| || || ||| || || Sbjct 110177 GCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAAC 110236 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 || |||| || | || || || || | || || | ||| | ||||| |||| Sbjct 110237 GGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTG 110296 Query 145478 TGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 || | ||||| |||| | || ||| | ||| | | ||| |||||||| Sbjct 110297 TGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTT-GAT----GTCGATAA 110351 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA-- 145590 | || |||| |||| || | ||| || || | | | || |||| ||||||||| Sbjct 110352 TCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAAG 110411 Query 145591 -CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 ||| || | ||| || | |||| |||||| || |||| |||||| || | Sbjct 110412 TCCGCTCCGGGGTGACGTACA------TGTTGAGGGCGATGGAGGCCAGATTACAGACCG 110465 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| || | | |||||| ||||| || | ||| | ||||| || ||||||| Sbjct 110466 CTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGG 110525 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | |||||||| ||||| || || ||||||||||| ||||| ||||| ||||||||||| Sbjct 110526 TGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCG 110585 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTG 145827 || |||||| ||||| ||| | ||| || || || | ||| || |||| Sbjct 110586 TACCCGTCTCCGTCTGCGACTCGATGAT--GGCGTACCACAGCTGCTGAGCCTTCACCAC 110643 Query 145828 CTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 ||| | | || || | || || | ||||||||||||||||| | || | Sbjct 110644 ACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCA 110703 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 ||| ||| ||| || ||||| ||||||||||||||| ||||| | |||| | Sbjct 110704 GCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTC 110763 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTTTG 146005 || | || ||| |||| ||| || | ||| || ||||| | | ||| | || || || Sbjct 110764 CACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTG 110823 Query 146006 CAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCAC 146065 | ||||| || |||| ||||| | || | | | ||| ||||||| Sbjct 110824 C--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCAC 110881 Query 146066 GGTTCAATATAGACGGCGAGGGCTCC--TTTTCGT-TTGCCACCCTGGTCCACGTGACGT 146122 || || | || | ||||| |||||| | || | |||||||||||||| |||| ||| Sbjct 110882 GGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGC 110941 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---A 146179 || ||||||| | || | || |||||| ||| ||| ||| ||| || || | Sbjct 110942 GCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCA 111001 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCC 146238 ||| || | | || ||| | | ||| || ||| |||| || || ||| Sbjct 111002 GAG---ATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCC 111058 Query 146239 GTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCT 146298 | ||||||| || ||| || | || || || |||||||| || ||||| ||| Sbjct 111059 G-ACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTC 111117 Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358 | ||| ||||||| ||||| | ||| ||| | | | || || || ||| | Sbjct 111118 TTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAG 111177 Query 146359 CGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGT 146417 |||||| ||||| || || || || || | || || || || ||||| || Sbjct 111178 AGTCGGGGAGGCGTGGGTGAACCACTTCTCCG-ACAGCAGGTTGTAGGTCTCGATGGCTG 111236 Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 | | ||||| || || || | | || | |||||||||||| || || |||| Sbjct 111237 CATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATGTGCTGCGGACGCT 111296 Query 146478 CCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAAAA 146537 | ||||||| || ||||| |||| |||| | |||||| || ||| | ||||| | Sbjct 111297 CGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGA 111356 Query 146538 ATTTGTA 146544 | ||||| Sbjct 111357 AGTTGTA 111363 >seq1721 Length=144067 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| ||| |||| || | ||||||||| || || Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||||| | ||| | || || ||| ||||| Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 117975 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || || ||||| || || ||||||||| Sbjct 117974 TCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 117927 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || |||||| || | || | || |||||||| || |||||||| || Sbjct 118610 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 118551 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || | ||||||||| || || Sbjct 118550 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118491 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | ||| | || ||| ||| ||| | Sbjct 118490 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 118431 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 118430 TCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||||||||| | || | ||| || || ||||| |||||||| || Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | | ||||||||| || || Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | || || ||| ||||| Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 118203 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 118202 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||||||| | || | || |||||||| || |||||||| ||| Sbjct 109123 CCACCCCTCAGACGCAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 109064 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || | ||||||||| || || Sbjct 109063 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 109004 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 109003 ATGCCTTCCTTGTC 108990 >seq1980 Length=102293 Score = 120 bits (132), Expect = 3e-22 Identities = 87/101 (86%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | ||||||||| | ||||| |||||| |||||||||| |||||||||||||| | Sbjct 5473 TGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGT 5532 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 | || ||||||||||| |||||||| ||||||||||| ||| Sbjct 5533 TGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGT 5573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471978472869120