Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq210 109 4e-19
seq1721 89.7 4e-13
>seq210
Length=679747
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | || | ||| || | ||| || |||||||| || || ||||||||||| |
Sbjct 555759 CCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555700
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||| || || || ||| | || |||| ||| ||||| |||
Sbjct 555699 AGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGG 555640
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || |||||| ||||| | | | ||||||| |||||||
Sbjct 555639 ATCCCCTCTTTGTCCTGGATCTTTGCT--TTCACATTCTCTATGGTGTCGCTGGGCTCCA 555582
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| ||||||||| || || |||| || || ||||| |||||||| |||
Sbjct 555581 CCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATCTTG 555529
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | || | ||| |||| || || |||||||| || || ||||||||||| |
Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || |||| || || || ||| | || |||| ||| ||||| |||
Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || ||| || || | | | |||||||| |||||||
Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCT--TTGACGTTCTCGATAGTGTCGCTGGGCTCCA 555810
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| |||||||| || ||||| || || || ||||| ||||||||
Sbjct 555809 CCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761
>seq1721
Length=144067
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||| || ||||| ||||||||||| | | ||| | | ||||||| ||
Sbjct 118358 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGC 118299
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | ||||||| ||| ||||| || | |||||| ||||| || ||
Sbjct 118298 TTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTG 118239
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||| | |||||| || | ||||||||| || || |
Sbjct 118238 GC--CTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAG 118181
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
| || || ||||| || ||||||||
Sbjct 118180 TGAGGGTCTTGACGAAGATCTGCAT 118156
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/210 (70%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | | || |||| ||
Sbjct 118130 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 118071
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || | || ||| ||||| || | ||| || ||||| ||||
Sbjct 118070 TTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTA 118011
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | ||||| | |||||| || | ||||||||| || || ||
Sbjct 118010 GCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTG 117951
Query 16913 AGCGTTTTGACAAAAATCTGCAT-TTTGTA 16941
|| ||||| ||||| |||||||| ||||||
Sbjct 117950 AGGGTTTTCACAAAGATCTGCATGTTTGTA 117921
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||| | | ||| | | ||||||| ||
Sbjct 118586 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGC 118527
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| || | || | || ||| ||||| || | || || ||||| || ||
Sbjct 118526 TTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTG 118467
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| |||| ||||||||| ||||| |
Sbjct 118466 GC--CTTGACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAG 118409
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
| || || ||||| || ||||||||
Sbjct 118408 TGAGGGTCTTGACGAAGATCTGCAT 118384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405059276475820
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