Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq755 513 2e-140 seq1980 96.9 4e-15 >seq755 Length=318311 Score = 513 bits (568), Expect = 2e-140 Identities = 1314/1991 (66%), Gaps = 21/1991 (1%) Strand=Plus/Plus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 ||| ||||||||| | || || | | ||||| ||||| || ||||| | || Sbjct 109789 CTGGATGGATCCATTGTGAGCGATGAGCTGGTTCTTCATCTCCTCGTTCCACAGCCCCCT 109848 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 ||| || | || | || || || || || || | ||||| || || |||| || || Sbjct 109849 CTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCT 109908 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 || ||||| || || ||||| || | || | ||||| || || |||| || || || Sbjct 109909 GCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGC 109968 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 || || || || ||||| || |||| || | || || || | |||| | | ||| Sbjct 109969 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGAT 110028 Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62397 || || || || | | ||| | ||| || || | ||| | | Sbjct 110029 CTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGG--CGTCTTCTCCCACATGTCG 110086 Query 62398 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 62455 | || || || || || ||| | || || | || || ||||| || || || Sbjct 110087 TACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCG 110146 Query 62456 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62515 | || || || || |||||||| | ||| |||| || ||||| |||||||| | | Sbjct 110147 GCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATG 110206 Query 62516 TTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 62575 || || || || || |||| ||||| || | | | ||| || || ||||||||| Sbjct 110207 TTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCT 110266 Query 62576 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62635 || ||||| || || || ||||| || || || | ||| || || | |||||||| || Sbjct 110267 AAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGC 110326 Query 62636 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 62695 | || || || || || || ||||| || || || ||| |||| ||||||||| ||| Sbjct 110327 ACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACA 110386 Query 62696 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACA 62752 | | |||||| ||| ||||| || || | || ||||||| | || | Sbjct 110387 TACGCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGGGTGACGTACATGTTGAGGGCGATG 110446 Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || ||||||||||| || |||||||| | | | |||| | || || ||||| Sbjct 110447 GAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAG 110506 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 || || || ||||||||||| || | ||| || || || ||||| |||| || || || Sbjct 110507 AGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCT 110566 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 62931 || || || ||| | || ||||| || || |||| || || || || || | ||| | | Sbjct 110567 TTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGC 110626 Query 62932 GACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGTGTATACAAT 62989 || ||||||| | | | ||| ||| ||| | || || | ||||| | Sbjct 110627 TGCT-GAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTC 110685 Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAAC 63049 | || ||||| || ||||| | ||||||||||||||| | | |||||||||| Sbjct 110686 C--TCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGA 110743 Query 63050 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TAT 63108 ||||| || || || ||| | ||||| || ||||| || |||||||| || || Sbjct 110744 GACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAG 110803 Query 63109 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63168 ||| || ||||||| || || ||||| |||||||| ||||| || || |||||||| | Sbjct 110804 AAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTC 110862 Query 63169 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63228 | | ||| | |||||||| |||||||| ||||| | |||| || | ||||| || Sbjct 110863 GAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCC 110922 Query 63229 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 63288 ||||| || | ||| | || ||||| || |||||||||| ||| || | | || || Sbjct 110923 ACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTT 110982 Query 63289 GGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAG 63348 ||| | |||||||| || ||||| |||||||| ||| | || || | | | Sbjct 110983 GGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACCGCCAC 111042 Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408 ||| || || || ||| || ||||| | || || | || | || ||||||||||| Sbjct 111043 ACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCC 111102 Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63468 || || || || || ||||| || || || ||||| |||| || | | | || Sbjct 111103 TTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 111162 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528 ||| || || || | || || || ||||| || ||||| || || || || || ||||| Sbjct 111163 TCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 111222 Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588 ||||| || |||| || || ||| || || |||||||| | || | ||| | ||| Sbjct 111223 GGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCAT 111282 Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648 |||||| || | || | | ||| ||| || ||||||| ||||| |||| ||| Sbjct 111283 GTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGT 111342 Query 63649 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 63708 || || || || ||||||| || || |||| ||| | || || |||||||||| Sbjct 111343 CTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTGTCGAAGATTATGGCCGAGTTGAGGCG 111402 Query 63709 ATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCC 63768 || || | | ||| | || | || |||| || || || | || | Sbjct 111403 GTCTTTGTTCTCAAGAACAATGTCGAGCGTCTCCTTTGAGATCATGGGGGA--GTGGCGT 111460 Query 63769 ATTTTTA--GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63826 | || | || ||||| |||||| | | |||||||| || || || || | ||| || Sbjct 111461 TTGTTCAAGGGGTTGACGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACTTTCTTG 111520 Query 63827 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || || ||||| || || || || || || | ||| || || ||||| || || || ||| Sbjct 111521 GTCTCCTTGTGCAGGTTAGAGACAGCGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGT 111580 Query 63887 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACA 63946 | || || |||||| || || || || |||| ||||| | || || || || || Sbjct 111581 TTAGTTGTGAGAGTGGCAGCGATCTCTGCAGCCAACGTGTCGAGCTCCACAGTGGTGACT 111640 Query 63947 CCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTG 64006 || | || | || ||||| |||||||| | || | || || | | |||| | Sbjct 111641 CCGCTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCCGGGTCCACAAAGTCAGAG 111700 Query 64007 TTTAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGACATTTTC 64065 || | || || || || |||| || ||||| |||||||| || |||||||| ||| Sbjct 111701 TTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGCGTTC 111759 Query 64066 CTTGTATCCAT 64076 || | ||||| Sbjct 111760 CTGGCGTCCAT 111770 >seq1980 Length=102293 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || || || || | |||||||| || ||||| ||||| || || || || | ||| Sbjct 6658 GTGCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCTGACAGCAAGTTG 6717 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || ||||| ||||| || || || | || ||||||||| ||||| || | ||| | | Sbjct 6718 TAGGTGTCAATGGCTGAATCAATGTCTCCTTTATGAATTCCAACTGCCACTCTCATCAGC 6777 Query 63587 ATGTGCTGAGGTCTTTCA 63604 ||||||||||| || ||| Sbjct 6778 ATGTGCTGAGGCCTCTCA 6795 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| || || || ||||| || || |||||| || | || || ||||||||||||| Sbjct 3987 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCTATATGGATAT 4046 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 | | || || || || || ||| |||| || | ||||| ||||| || | || ||||| Sbjct 4047 TAAGGGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCTGCCATCTTGAGAACCGTCT 4106 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62085 | || | |||||||| | |||||||| | |||| | ||| || || Sbjct 4107 TCTGGGAGATTTCCCACACTGTTTTATAGAGCTGCTTCAGATCATCAGG 4155 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| || || |||||||| || || || || || | | || || || | Sbjct 7740 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCCACCCGCGCAGCCAGGA 7799 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | || || || ||||||| || || ||||| || | || |||||||||||||||| Sbjct 7800 TTGCGTAGTCAGGATGTTTAGTGGTGAGCGTGGCAGCAGTCTCCGCTGCCAGAGTGTCCA 7859 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | || | || ||||| |||||||| Sbjct 7860 GTTCCACGGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 7905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633585919112800