Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1721 127 2e-24 seq755 89.7 4e-13 >seq1721 Length=144067 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || ||| Sbjct 118156 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 118215 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||||||||||||| ||||| || || || Sbjct 118216 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAG 118275 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| ||||| ||| | |||||| ||||||| |||| || |||||| Sbjct 118276 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118335 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||||||||||||| Sbjct 118336 ATCCAAAAAGAATCCACC 118353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || ||| | Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || ||||||||||| || ||||| || || || Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || ||||| ||| | |||||| ||||||| |||| || |||||| Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 118564 ATCCAGAAGGAGTCCAC 118580 >seq755 Length=318311 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756 || ||||||| ||| ||||| || |||| | | |||| ||||| ||||| | | Sbjct 110444 ATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTG 110503 Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816 || | || || || |||||||||| || || || || || ||| ||||||| || Sbjct 110504 CAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 110563 Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 |||||||||| |||||||||||| ||||| || Sbjct 110564 TCTTTGTACAGCATGTACGGCGTACCCGTCTC 110595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419698238399170