Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 127 2e-24
seq755 89.7 4e-13
>seq1721
Length=144067
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| || || |||
Sbjct 118156 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 118215
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || |||||||||||||| ||||| || || ||
Sbjct 118216 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAG 118275
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| ||||| ||| | |||||| ||||||| |||| || ||||||
Sbjct 118276 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118335
Query 22399 ATTCAAAAAGAATCCACC 22416
|| |||||||||||||||
Sbjct 118336 ATCCAAAAAGAATCCACC 118353
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| || || || || ||| |
Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || ||||||||||| || ||||| || || ||
Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || || ||||| ||| | |||||| ||||||| |||| || ||||||
Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 118564 ATCCAGAAGGAGTCCAC 118580
>seq755
Length=318311
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756
|| ||||||| ||| ||||| || |||| | | |||| ||||| ||||| | |
Sbjct 110444 ATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTG 110503
Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816
|| | || || || |||||||||| || || || || || ||| ||||||| ||
Sbjct 110504 CAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 110563
Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
|||||||||| |||||||||||| ||||| ||
Sbjct 110564 TCTTTGTACAGCATGTACGGCGTACCCGTCTC 110595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419698238399170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |