Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 185 2e-41
seq210 161 2e-34
seq735 87.8 3e-12
seq51 86.0 1e-11
seq465 84.2 4e-11
seq119 84.2 4e-11
>seq1721
Length=144067
Score = 185 bits (204), Expect = 2e-41
Identities = 174/219 (79%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || || ||||| || |
Sbjct 118601 AGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 118542
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || ||||| || | || || ||||| || ||||| ||||||
Sbjct 118541 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCC 118482
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGT 68422
|||||||| ||||| |||||||| |||||||||||| |||| || || |||| |||
Sbjct 118481 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC-GCTGGGCTCAACCTCCAGGGT 118423
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| ||||| ||||||||||||||||| ||||||||
Sbjct 118422 GATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || ||||| |||||||||||||| || || ||||| || |
Sbjct 118373 AGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGG 118314
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || || || || || || || ||||| || |||||||| |||
Sbjct 118313 CCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCC 118254
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| |||||||| ||| |||||||| | || || || | ||||
Sbjct 118253 TTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTG 118194
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || ||||||||||||||||| ||||||||
Sbjct 118193 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 118145 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 118086
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| || | || || ||||| || ||||||||||||
Sbjct 118085 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCC 118026
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || || || |||||||| |||||||||||| | || || || | ||||
Sbjct 118025 TTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTG 117966
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || |||||||| || || || ||||||||
Sbjct 117965 ATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 117928
Score = 102 bits (112), Expect = 2e-16
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 68225 ATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTT 68284
|||||| | || || | || |||| || | ||| || |||||||| || ||||||||
Sbjct 109133 ATTTTACTGCCCACCCCTCAGACGCAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTT 109074
Query 68285 ATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344
|| |||||||| || | ||||| || | |||||| || ||||| || | || || ||
Sbjct 109073 GTAGTCGGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTG 109014
Query 68345 GTCGGGTGGAATGCCTTCCTTGTC 68368
||| || |||||||||||||||||
Sbjct 109013 GTCAGGGGGAATGCCTTCCTTGTC 108990
>seq210
Length=679747
Score = 161 bits (178), Expect = 2e-34
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || |||| |||| ||| || ||||||||||| |||||||| || || |||
Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| ||||| || || || || || ||||| || ||
Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413
|| || || ||||| || || || || |||||| |||||| ||||| |||| || ||
Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTC-GCTGGGCTCCAC 555809
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||| || || ||||||||||| || || ||||||||
Sbjct 555808 CTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761
Score = 152 bits (168), Expect = 9e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||| |||| || | || || ||||||||||| |||||||| || || |||
Sbjct 555759 CCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555700
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || ||||| || || || ||||| || ||
Sbjct 555699 AGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGG 555640
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || || ||||| || |||||||| || || ||| |||||||| ||| | || ||
Sbjct 555639 ATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTC-GCTGGGCTCCAC 555581
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || || | |||||| || || ||||||||
Sbjct 555580 CTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| |||||||| || || |||| |||| ||| || ||||||||||| |||||||| ||
Sbjct 556445 TTAGTTTCCTCCACGGAGACGCAGGACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTA 556386
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
|| ||||| || | |||||||| | |||||| || ||||| || || | || |||||
Sbjct 556385 GTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTC 556326
>seq735
Length=345074
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | |||||||||| ||||| ||| |||||||||| ||| |||||
Sbjct 335228 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 335169
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| || ||| |||||||||||| |||||||||||
Sbjct 335168 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 335133
>seq51
Length=1238541
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| || ||||||| || ||||||||||||||||
Sbjct 689910 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 689969
Query 84516 CCCACATCGGGC 84527
||||||| ||||
Sbjct 689970 CCCACATTGGGC 689981
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| || ||||||| || ||||||||||||||||
Sbjct 695681 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 695622
Query 84516 CCCACATCGGGC 84527
||||||| ||||
Sbjct 695621 CCCACATTGGGC 695610
>seq465
Length=450798
Score = 84.2 bits (92), Expect = 4e-11
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTC 68416
||||||||||| || ||||| |||||||| |||||||| || |||| || || ||
Sbjct 33778 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTATC-GCTGGGCTCAACCTC 33720
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||||||| ||||| | ||||| ||||| ||||||||
Sbjct 33719 AAGGGTGATGGTTTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 33675
>seq119
Length=790224
Score = 84.2 bits (92), Expect = 4e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAG 268462
|||||||||||||| |||||||| |||||| || |||||| ||| ||||| ||| |
Sbjct 569201 GGGCTCTCGTGGTTAAAGAGGATCCCGTTGACAGCAAACATGTTATAGGCCTCTCGGAAA 569260
Query 268463 TTCACGACCGTCCAGTATGCAAACATCTTTGCAACT 268498
||||| || ||||||| ||| ||| ||| ||| ||
Sbjct 569261 TTCACCACAATCCAGTAGGCATACAGCTTAGCAGCT 569296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921555375010960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |