Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq755 545 4e-150 seq1980 114 2e-20 seq735 93.3 8e-14 seq35 84.2 4e-11 >seq755 Length=318311 Score = 545 bits (604), Expect = 4e-150 Identities = 989/1435 (69%), Gaps = 40/1435 (3%) Strand=Plus/Plus Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTC- 244068 || || ||||| ||||||||||| | ||| | ||||||||||| ||| | ||| Sbjct 109796 GATCCATTGTGAGCGATGAGCTGGTTCTTCATCTCCTCGTTCCACAGCCCC---CTCTCT 109852 Query 244069 --CAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126 ||| | | || |||||| ||| || | ||||||||| || ||||| || | ||| Sbjct 109853 GTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGG 109912 Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186 ||||| ||||||| || | ||||||| ||| |||| ||||| ||||| || ||| Sbjct 109913 GTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTG 109972 Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246 || || ||||| || | || |||||| |||||||||||||||| | ||| Sbjct 109973 GAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTC 110032 Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATG 244306 | ||| ||||||||||||| | | |||| || || |||||||| Sbjct 110033 TCCTTCAGCAGCTTCCAGTCCCACAGGTC-----GGTCGGCGTCTTCT----CCCACATG 110083 Query 244307 TCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCG--- 244363 || ||||||| | ||||||||||| ||| ||||||||| ||| |||||| ||| Sbjct 110084 TCGTACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAAC 110143 Query 244364 TCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATC 244423 ||| |||| |||||| |||||| | || || || ||||||||||||||||||||||| Sbjct 110144 TCG-GCTG--CCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATG 110200 Query 244424 ATCTTGTTCATGTCGCGG-GCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGAC 244482 |||| | | || | |||| | || || ||| | ||| | |||||| | Sbjct 110201 TGGATGTTGA-GCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGC 110259 Query 244483 GTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGC 244542 ||| || | || ||||| ||||| ||||| || ||||| ||||||||||| | || Sbjct 110260 GTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGC 110319 Query 244543 TTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCG 244602 ||| ||||| ||||| ||||| |||||| | |||||| ||||| | ||| | Sbjct 110320 TTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTT 110379 Query 244603 GACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCT 244662 | ||| | ||||| | |||||| | || ||| | || ||||| Sbjct 110380 GGTGACATACGCCAGTTTTTTAAAGTCAAA-----AG---TCCGCTCCGG-GGTGA---- 110426 Query 244663 CACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGT 244722 | || ||||||||||| | |||||| || ||||| || ||||| || | |||| Sbjct 110427 --CGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGT 110484 Query 244723 GTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATT 244782 ||| | ||| || || ||||||||||| |||||||||||||||||||| | ||| || || Sbjct 110485 GTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTT 110544 Query 244783 GGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842 | ||| |||||||||||| ||||| |||||| | ||| || ||||| ||| | Sbjct 110545 GCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGA 110604 Query 244843 GACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC 244902 ||| || | || ||| || | | |||||| ||| | ||| | || || Sbjct 110605 CTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCCTTCCTT 110664 Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA 244962 ||| || | |||||| || |||| ||||| |||||| |||||| || || || || Sbjct 110665 CTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACA 110724 Query 244963 CGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGT 245021 | || ||| ||||| ||| ||| || | | || ||||||| |||||| || | Sbjct 110725 GG-CGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGAT 110783 Query 245022 CGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCT 245081 |||||||||| ||||| | ||| ||||| |||| ||||||||| ||| || ||||||| Sbjct 110784 CGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCT 110843 Query 245082 TCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGG 245141 || ||||||| | ||||| || ||||| | |||||| ||||||| ||| | |||| || Sbjct 110844 TCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGG 110903 Query 245142 CGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCA 245201 | ||||| | ||||||||| |||||||| || | | | |||| | | | || Sbjct 110904 CTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCA 110963 Query 245202 GGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC 245261 | | || || | ||||| |||| ||| ||||| || ||||||| || || | Sbjct 110964 GCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATC 111023 Query 245262 TGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCT 245321 ||| | ||||| | || || | || || || ||||||||||||||| || || Sbjct 111024 TGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCT 111083 Query 245322 TGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGG 245381 | | ||||| ||||| || |||||||| |||||| |||||| |||||| || Sbjct 111084 TCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGG 111143 Query 245382 ACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 ||||||| ||| || | | | | |||||| ||||| ||| ||||||||| || Sbjct 111144 ACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAA 111198 >seq1980 Length=102293 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 ||| ||||| || |||||||| ||||| ||| ||||| |||| |||||||| || Sbjct 5947 CATAAAGAGATCTGGGATCCACAGGGCAAAGAACAGGTCTCTGGCTCTCTGCTCTTCTTT 6006 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 || ||||||||| ||| ||||||||||||||| || || | ||||| ||||||| ||| Sbjct 6007 ACCGGTGTTCTTCTTCAACTCCAAAAAGTCAAACACATCAAAATGCCATGGCTCCAGGTA 6066 Query 245131 GACAGCGAGGGCGCCGGG 245148 ||||||| ||| || || Sbjct 6067 CACAGCGAAGGCCCCAGG 6084 Score = 100 bits (110), Expect = 5e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| || ||||| || ||||| | |||| ||||| ||||||| || | ||| ||| Sbjct 4449 ACCTGGAATTCTCCTGAGAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAAGCCTCAATG 4508 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 ||| |||||||||| ||||| || ||| || || ||||| || | || ||||| Sbjct 4509 GACTCATTGTTGCCCAGGATCTGAGCAGTGGAAGCTGTGGGCATCGGAGCCAAAAGCAGG 4568 Query 244217 CTGTTCCTCACGCCGTGCCT 244236 ||||||||||| |||||||| Sbjct 4569 CTGTTCCTCACACCGTGCCT 4588 Score = 100 bits (110), Expect = 5e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764 |||||| || | ||||||||| || ||||| ||||| || || ||| | |||||||| Sbjct 5456 CACCTCATCTTTGCTGGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGT 5515 Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824 |||||| | || || ||| ||| ||||||||||||||| ||||||||| | || Sbjct 5516 GCCCAGATTTTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGT 5575 Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879 |||||| || ||| | ||| |||| || ||| || | | |||||| ||| Sbjct 5576 CCCGGTTTCTGTCTGTGACTCGATGACGGCGTACCACAGCTGCTGAGCCTTCACC 5630 Score = 93.3 bits (102), Expect = 8e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 244322 CCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG-GCCAGCTT 244380 ||||||||||| || ||| ||||||| || || |||| || | | ||||||| Sbjct 4869 CCCTTGCTGACAGGAGAGCCAGCGTAGGTTTCATAAGGGCCGT-GCTCAGCTGCCAGCTC 4927 Query 244381 ACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGC- 244439 |||||| | || ||||| ||||||||||||||||| |||||| |||| | || | Sbjct 4928 ACAGCTGGCCTCCAGGGCAGCGTAGTAGATGGTCTCAAAGATCTGAATGTTGA-GTAACT 4986 Query 244440 GGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCA 244499 |||||| || ||| || || ||| | || ||| | || ||||| ||||||| Sbjct 4987 GGGCCTCTGGGCTTTCGAATGGATGGCGCATAAGGATAAAGGCATCAGCCAGACCCTGCA 5046 Query 244500 CGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 | ||||| || || || ||||| ||| |||| || Sbjct 5047 CACCGATTCCAATTGGCCTGTGACGCCTGTTAGA 5080 >seq735 Length=345074 Score = 93.3 bits (102), Expect = 8e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| |||||||||||||| ||||||| ||||||||||| || |||||||| Sbjct 335138 CCCCTTCGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAGCG 335197 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 335198 GGTGGGCGAGTACCAG 335213 >seq35 Length=1322159 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || || ||| | || || ||||||||||||||||| || | || || |||||| ||| Sbjct 415242 GTGGCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGTTCATTTGCTGCCATCTATTGG 415183 Query 42768 CTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 || ||| ||| ||| | |||||| || || |||| ||| || || || ||||||||||| Sbjct 415182 CTAAAGAAGAGAGGCCT-GATGCCTGGTCTGACCTACTCCAATGAGCTGATCAGCAGGGA 415124 Query 42827 CGAGG 42831 |||| Sbjct 415123 TGAGG 415119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944270522931680