Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq210 132 1e-25
seq1721 105 2e-17
>seq210
Length=679747
Score = 132 bits (146), Expect = 1e-25
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | ||| ||||| || ||||| | || || || || |||
Sbjct 555951 TCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAG 555892
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| || ||||| ||||||||||| ||||| |||||
Sbjct 555891 ATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTC 555832
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||||| | || || || || ||||| ||||| ||||| || ||||| ||
Sbjct 555831 TCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACA 555772
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 555771 AAGATCTGCAT 555761
>seq1721
Length=144067
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || ||||||
Sbjct 118118 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 118059
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || | || || ||||| || ||||||||||| || || || ||
Sbjct 118058 ATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTC 117999
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || ||||| ||||| ||||| || || || || || ||
Sbjct 117998 TCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACA 117939
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 117938 AAGATCTGCAT 117928
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| ||||| || || || | || || || ||||||
Sbjct 118574 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 118515
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || | || |||||||| || || ||||| || || || || ||
Sbjct 118514 ATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTC 118455
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| | || || || || ||||| ||||| || || || |||||||||
Sbjct 118454 TCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACG 118395
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 118394 AAGATCTGCAT 118384
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || ||||| | ||| ||||| || || || | || || || || ||
Sbjct 118347 TTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAA 118288
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | ||| || | || || || || || || ||||| || || || || ||
Sbjct 118287 GATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 118228
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || | || || || || ||||| ||||| || || || ||||||||
Sbjct 118227 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 118168
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 118167 GAAGATCTGCAT 118156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179566464874604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |