Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq210 132 1e-25 seq1721 105 2e-17 >seq210 Length=679747 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 555951 TCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAG 555892 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || ||||| ||||||||||| ||||| ||||| Sbjct 555891 ATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTC 555832 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||||| | || || || || ||||| ||||| ||||| || ||||| || Sbjct 555831 TCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACA 555772 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 555771 AAGATCTGCAT 555761 >seq1721 Length=144067 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || |||||| Sbjct 118118 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 118059 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || | || || ||||| || ||||||||||| || || || || Sbjct 118058 ATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTC 117999 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || ||||| ||||| ||||| || || || || || || Sbjct 117998 TCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACA 117939 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 117938 AAGATCTGCAT 117928 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || || || | || || || |||||| Sbjct 118574 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 118515 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || | || |||||||| || || ||||| || || || || || Sbjct 118514 ATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTC 118455 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| ||||| || || || ||||||||| Sbjct 118454 TCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACG 118395 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 118394 AAGATCTGCAT 118384 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | ||| ||||| || || || | || || || || || Sbjct 118347 TTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAA 118288 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| || | || || || || || || ||||| || || || || || Sbjct 118287 GATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 118228 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || || || ||||| ||||| || || || |||||||| Sbjct 118227 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 118168 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 118167 GAAGATCTGCAT 118156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179566464874604