Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq210 125 8e-24 seq1484 93.3 5e-14 seq116 91.5 2e-13 seq1711 89.7 6e-13 seq36 87.8 2e-12 seq402 86.0 7e-12 seq1344 84.2 2e-11 seq956 84.2 2e-11 seq579 84.2 2e-11 seq1604 82.4 8e-11 seq1150 82.4 8e-11 seq1015 82.4 8e-11 seq531 82.4 8e-11 seq133 82.4 8e-11 >seq210 Length=679747 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||||| ||||| || | ||| ||| || || || ||||| |||| Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || ||||||||||| || || || || | ||||||||| | || Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||| |||||| |||||| ||||| || | | |||||||| | ||||| Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACC 555808 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 555807 TCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||||| || | ||| | ||| ||| || || || ||||| |||| Sbjct 555759 CCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555700 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||||||||| ||||| || | ||||||||| | || Sbjct 555699 AGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGG 555640 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||| |||||| ||| ||| ||| | || | | |||||||| | ||||| Sbjct 555639 ATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACC 555580 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 || | |||||||| || || || | ||||| |||||||| ||||| || || Sbjct 555579 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATCTTGAC 555527 >seq1484 Length=186380 Score = 93.3 bits (102), Expect = 5e-14 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 56995 ATGAAAAATTTT---CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051 |||||||| | | |||| || | | |||||||||| ||||||||||||||||||||| Sbjct 120263 ATGAAAAAGTATGACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 120204 Query 57052 ACATACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||| |||||| Sbjct 120203 GGATACTCACCACTATACTAACGAGGA 120177 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 119851 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 119792 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 119791 TACTAACGAGGAATG 119777 >seq116 Length=916301 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 339380 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 339439 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 339440 TACTAACGAGGACTG 339454 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 455133 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTATCCACTA 455074 Query 57067 TACTACCGAGGA--TTGAATATA 57087 ||||| |||||| ||||| ||| Sbjct 455073 TACTAACGAGGAAGTTGAACATA 455051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 465574 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTATCCACTA 465515 Query 57067 TACTACCGAGGA--TTGAATATA 57087 ||||| |||||| ||||| ||| Sbjct 465514 TACTAACGAGGAAGTTGAACATA 465492 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| || | | |||||||||| ||||| |||||||||||||||| ||||| ||| Sbjct 580183 TTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCA 580124 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 580123 CTATACTAACGAGGA 580109 >seq1711 Length=145657 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 100316 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 100257 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 100256 TACTAACGAGGA 100245 >seq36 Length=1280823 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 535337 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 535278 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 535277 ATACTAACGAGGA 535265 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 536964 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 536905 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 536904 ATACTAACGAGGA 536892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 538347 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 538288 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 538287 ATACTAACGAGGA 538275 >seq402 Length=484939 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 248372 TTCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 248431 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 248432 CTATACTAACGAGGA 248446 >seq1344 Length=280262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 56988 AACGTTTATGA----AAAATTTT-CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGT 57042 ||| ||||||| | ||| || |||| || | | |||||||||| ||||| |||||| Sbjct 61108 AACATTTATGATGCCATAATCTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGT 61049 Query 57043 GACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||| ||||||||||| |||||| Sbjct 61048 GACAGGCGGAGATACTGTCCACTATACTAACGAGGA 61013 >seq956 Length=327604 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 288415 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 288356 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||| ||| Sbjct 288355 TACTAACGAGGACTGA 288340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 294443 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 294384 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||| ||| Sbjct 294383 TACTAACGAGGACTGA 294368 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 295227 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 295168 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||| ||| Sbjct 295167 TACTAACGAGGACTGA 295152 >seq579 Length=408200 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 73134 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 73075 Query 57067 TACTACCGAGGATTGAATA 57085 ||||| |||||| ||| || Sbjct 73074 TACTAACGAGGACTGAGTA 73056 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 71982 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 71923 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 71922 TACTAACGAGGACTG 71908 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 121219 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 121278 Query 57067 TACTACCGAGGATTGAAT 57084 ||||| |||||| || || Sbjct 121279 TACTAACGAGGACTGCAT 121296 >seq1604 Length=159381 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 148097 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 148038 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 148037 TACTAACGAGGACTG 148023 >seq1150 Length=355785 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 56997 GAAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||||| ||| |||| || | | |||||||||| ||||| |||||||||||||||| | Sbjct 3608 GAAAACTTTGACCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGA 3549 Query 57055 TACTCACCACTATACTACCGAGGATTG 57081 |||| ||||||||||| |||||| || Sbjct 3548 TACTGTCCACTATACTAACGAGGACTG 3522 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 4334 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 4393 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 4394 TACTAACGAGGACTG 4408 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 7692 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 7751 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 7752 TACTAACGAGGACTG 7766 >seq1015 Length=273809 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct 264481 TCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 264540 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 264541 ATACTAACGAGGA 264553 >seq531 Length=413649 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 56997 GAAAAATT--TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||||| || | |||| || | | |||||||||| ||||| |||||||||||||||| | Sbjct 142265 GAAAACTTGATGCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGA 142206 Query 57055 TACTCACCACTATACTACCGAGGATTG 57081 |||| ||||||||||| |||||| || Sbjct 142205 TACTGTCCACTATACTAACGAGGACTG 142179 >seq133 Length=897885 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 260572 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 260631 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 260632 TACTAACGAGGACTG 260646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543173294849120