Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1721 127 2e-24 seq210 116 4e-21 >seq1721 Length=144067 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| | || | ||||| || || | || ||||||||||| |||||||| || | Sbjct 118383 ACCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 118324 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || ||||||||||| ||| | || |||| ||||||||| || || Sbjct 118323 GAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 118264 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| ||| | || |||| || || || Sbjct 118263 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGAC 118204 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 118203 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| | || | || || || || | || || || || || |||||||| || | Sbjct 118155 ACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 118096 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| ||||||||||| || | || | || ||||||||| || || Sbjct 118095 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGG 118036 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || ||||| ||| ||| ||| | || |||| || || || Sbjct 118035 AATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGAC 117976 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||||||||| || | ||||| || || || ||||| || Sbjct 117975 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 117925 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || |||||| | || || ||||||||||| Sbjct 118580 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 118521 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | || ||||||||| || ||||||||||| || ||||| || || ||| Sbjct 118520 GCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTG 118461 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || || | || || || || | || | |||||| || || | || Sbjct 118460 ACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTC 118401 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 118400 TTGACGAAGATCTGCAT 118384 >seq210 Length=679747 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || ||||| || |||||||| || | || ||||| | ||| Sbjct 555972 AGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCT 555913 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| | || |||| ||||||||| ||||| || || ||||| || Sbjct 555912 TCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCC 555853 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| ||||| || ||| | || || | || ||||| || | || | ||| Sbjct 555852 TGGATTTTA-GCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGT 555794 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || || || || ||||| Sbjct 555793 CTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499608463331920