Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq755 264 1e-65 >seq755 Length=318311 Score = 264 bits (292), Expect = 1e-65 Identities = 1029/1603 (64%), Gaps = 41/1603 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| ||||||||| || || || | ||||| | |||| Sbjct 111363 TACAACTTCTTCGGCTTCAAGACTCTGGAGCGCTCCTATCTGTTGAAGATCAACGGCAAA 111304 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||||| ||||| || |||| ||| | || || | || || ||| ||| Sbjct 111303 GTGGCCGAGCGTCCGCAGCACATGCTCATGAGGGTGTCCGTAGGAATCCACAAAACGGAC 111244 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG-----ACATGCGG---GACAAGAGGTATACCA 93889 || ||| ||| | | | ||| || ||| | || ||| ||| ||| Sbjct 111243 AT--CGA------TGCAGCCATCGAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCC 111192 Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 ||| ||||||| || |||||||| || ||| ||||||| |||| || |||| Sbjct 111191 ACGCCTCCCCGACTCTCTTCAACGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCC 111132 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 || | | | || | |||| |||| || || | |||| || ||| | ||||| Sbjct 111131 TGCTCGCCATGAAAGACGACAGCATCGAAGGCATCTATGACACTCTGAAGCAGTGTGCCC 111072 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 |||||| || | || || || ||||| | ||| | | | | ||| || Sbjct 111071 TCATCTCCAAGTCGGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCCACAGGAA 111012 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 ||||||| ||||||||||||| ||||||||| |||||||| ||||| | || | || Sbjct 111011 GCTACATCTCTGGTACCAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACA 110952 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| ||||||| ||||| ||||||||||| | ||| || | ||||| | | Sbjct 110951 ACAACACGGCGCGTTACGTCGACCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGT 110892 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | | ||||| |||||| |||||| | ||| |||| ||| |||||| || | Sbjct 110891 ACTTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAA 110832 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | |||||||||||||||| |||||||| || ||| | || || || || |||| Sbjct 110831 AGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCCTTTGGATCCCCGATCTGTTCATGA 110772 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | | || |||| ||| | |||| ||| | |||||||| | ||||| |||||| Sbjct 110771 AGAGGGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGTCCTGGACTGG 110712 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 ||| || || | ||||| || | || | | || || | | || | || Sbjct 110711 ACGAGTGCTGGGGGGAGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGG 110652 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 ||| | || || | ||| | |||||||| | ||| | || ||| ||||| Sbjct 110651 CCAAGCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGA 110592 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 |||||||||| ||||| ||| ||| ||| | |||| ||| |||||||||| | | Sbjct 110591 CGGGTACGCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATC 110532 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || |||||| || || || ||||| || || ||||| || || | |||| Sbjct 110531 TGGGCACCATCAAGTGCAGCAACCTCTGCACAGAAATCGTCGAATACACCAGCCATGACG 110472 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669 || | || || ||||| |||| ||||||| || || || | || || | || Sbjct 110471 AGGTAGCGGTCTGTAATCTGGCCTCCATCGCCC--TCAACAT--GTACGTCACCCCGGAG 110416 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGA 94729 || ||| || || | | | || | | | || | | || ||| | Sbjct 110415 CG--GACT------TTTGACTTTAAAAAACTGGCGTATGTCACCAAAGTAATCGTCAAAA 110364 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 ||||||||| | | ||||||| |||| |||||| || || || || ||||| || ||| Sbjct 110363 ACCTGAACAAGATTATCGACATCAACTACTACCCAGTGCCTGAAGCTGAGAATTCCAACA 110304 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 | || |||| ||||| ||||| || || ||||| || ||||| | | | |||| Sbjct 110303 AGCGCCACAGGCCGATCGGAATCGGAGTGCAAGGTTTAGCAGACGCCTTCATCCTCATGC 110244 Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 ||| || | || ||| || | | || | |||| ||||| | ||| | Sbjct 110243 GTCACCCGTTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTCGAGACCATCT 110184 Query 94910 ATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 | |||| || | || | | | | | | |||| | | || ||| || |||| Sbjct 110183 ACTACGCTGCTCTGGAGGCGAGCTG-CGAGCTGGC---AGCCGAGTTCGGCCCCTACGAG 110128 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 ||| | || || || | ||||||| | |||| |||| | |||| || | Sbjct 110127 ACGTACGAGGGCTCCCCAGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACG 110068 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTG 95085 || | | |||| |||| ||||||| || | | | || | |||| |||| ||| Sbjct 110067 CCGACCGACCTGTGGGACT-GGAAGCTGCTGAAGGAGAAGA--TCGCCAAAAACGGCGTG 110011 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 | ||| ||||| ||||||| |||||||| |||||||| || |||||||| || ||| Sbjct 110010 AGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGTAAC 109951 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 |||||||| |||| ||| |||| |||| | |||| | | |||| || |||| || Sbjct 109950 AACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCCGGCGAG 109891 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGAC 95265 || | || ||||| ||||| || |||||||| ||| ||||| || Sbjct 109890 TTTCAGATCGTCAACCCCCACCTGCTCAAAGACCTGACAGAGAGGGGGCTGTGGAACGAG 109831 Query 95266 AAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAG 95307 || | |||||||| || | ||| | ||| || ||| ||||| Sbjct 109830 GAGATGAAGAACCAGCT-CATCGCTCACAATGGATCCATCCAG 109789 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 |||||||||||||| ||||| | | | | || |||||| | || ||| |||||||| Sbjct 111753 GTCATGTTCGACAAAATCACCTCTCGCATCCAGAAGCTTTGCTACGGGCTGAACTCTGAC 111694 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 || ||||| || | | || | ||||||| |||| ||||| | || ||| ||||| Sbjct 111693 TTTGTGGACCCGGCCCAGATTACCATGAAGGTGATCCAGGGTTTGTACAGCGGAGTCACC 111634 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 ||||| |||||||| |||| || |||| |||| | | || || ||||| Sbjct 111633 ACTGTGGAGCTCGACACGTTGGCTGCAGAGATCGCTGCCACTCTCACAACTAAACACCCC 111574 Query 93511 GACTACTCCATTTTGGCTGCTCGAATC 93537 |||||| |||| | |||||||| ||| Sbjct 111573 GACTACGCCATCCTCGCTGCTCGGATC 111547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494687221255280