Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq755 206 3e-48 seq210 95.1 1e-14 seq1721 82.4 8e-11 >seq755 Length=318311 Score = 206 bits (228), Expect = 3e-48 Identities = 953/1498 (64%), Gaps = 52/1498 (3%) Strand=Plus/Plus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | || || || ||||||| | ||||||||||| | || || | | Sbjct 109856 AGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTG 109915 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||||| ||| | | || | ||| ||||| || || || || || || |||| Sbjct 109916 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAG 109975 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || ||||| |||| || || |||| || ||||| || | ||| Sbjct 109976 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCC 110035 Query 153189 TTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAAC 153248 |||| | || ||| |||||||| | | ||| ||| | ||||||||||||||| | Sbjct 110036 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGG 110095 Query 153249 ACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCG---TCGCGTTGGGCC 153305 | || ||| | || ||| | |||| |||| |||| ||| | ||| Sbjct 110096 ATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCT---GCC 110152 Query 153306 AGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA 153365 || |||||||| ||||| || || | ||||| ||||| ||| ||| || | ||||| Sbjct 110153 AGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGC 110212 Query 153366 ACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCC 153425 | || || ||| || |||| |||| || | |||||||| || | ||| Sbjct 110213 AGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCT 110272 Query 153426 TGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTA 153480 || | |||| ||||| || | || || |||| || || || || | Sbjct 110273 TGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCAC---- 110328 Query 153481 TGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTAT-- 153538 |||| |||| ||| |||||||| ||||| ||||| || | ||||| || | Sbjct 110329 TGGG-TAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACAT 110387 Query 153539 -CGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGG 153597 |||| ||||| | || ||| | ||| || || | | ||| | || | || Sbjct 110388 ACGCC---AGTTTTTTAAAGTCAAAAGTCCGCTC--CGGGGTG-ACGTACATGTTGAGGG 110441 Query 153598 CAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGG 153657 | || || |||||||||||||| || ||| || | | |||| | ||||| || | Sbjct 110442 CGATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTG 110501 Query 153658 CGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACG 153717 ||||||||||||||| || ||| ||||| ||| ||||| ||||| || | ||||| | Sbjct 110502 TGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGG 110561 Query 153718 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTAT 153777 |||||||| | ||||||||||| || ||||| |||| |||| ||| | || Sbjct 110562 CGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGG-CGTAC 110620 Query 153778 G-CAGGTCCTGCGCTCGCACC---CGCT--GCCGATAGCGGCCCTCGCTCTCGTATCGCT 153831 ||| | ||| || |||| |||| ||| | || || |||| || | Sbjct 110621 CACAGCTGCTGAGCCTTCACCACACGCTTGGCC-----CTCCCTTCCTTCTCATACCTGG 110675 Query 153832 CGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGAC 153891 ||| || ||||||||| || || |||| ||| | || || ||||| | |||| Sbjct 110676 TGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGAC 110735 Query 153892 ACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGA 153951 ||||||| ||||| | || | | || | |||||||||||| || | ||| | Sbjct 110736 ACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAA 110795 Query 153952 GCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA 154011 | ||||| | ||||| | ||| | |||||| || |||| ||||| | || Sbjct 110796 GGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGA 110855 Query 154012 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCT 154071 | | | | | ||| |||||| || || | ||| | ||| | ||| || | || Sbjct 110856 GGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCT 110915 Query 154072 TT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCA 154128 | || ||||| ||||||| ||| || | |||||| | || | || |||||| | | Sbjct 110916 TGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGA 110975 Query 154129 GGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCA 154188 | ||| | | | |||| ||||| | ||| | ||| || || | ||||||| Sbjct 110976 GCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATC-----TGATGCA 111030 Query 154189 CGTTAACGCCA-----ATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCG 154242 | | ||||| ||||| || |||| |||| || ||| || || | ||| | Sbjct 111031 GCTGACCGCCACACCGATGCCTCCAGCCG-ACTTGGAGATGAGGGCACACTGCTTCAGAG 111089 Query 154243 TCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTT 154302 | |||||||| |||||||| ||||| | | |||||| ||| || ||| | Sbjct 111090 TGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCT 111149 Query 154303 GCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGC 154362 | || || ||||| || ||||| || || ||||| || ||| || | Sbjct 111150 GTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCG 111209 Query 154363 TCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGA 154422 || || | ||| || |||||||| | ||||| || ||| || || | | | Sbjct 111210 ACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACA 111269 Query 154423 CGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATA 154480 | | ||||||||||||||||||||| ||||| ||| | || |||||||| ||||| Sbjct 111270 CCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATA 111327 >seq210 Length=679747 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | ||||| || || ||||||||||| Sbjct 555988 GCCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 555929 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || || || || || ||||||| | |||| || | ||| ||||| ||||| Sbjct 555928 GAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGG 555869 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| |||||| ||| | | || | |||||| | | |||||| Sbjct 555868 GATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCAC 555809 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | || || || || || || || ||||| ||||||||| || Sbjct 555808 CTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCT 555757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 ||||| || | ||| | | | ||||| || || ||||||||||| | || || Sbjct 555748 ACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACC 555689 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || || || ||||| | | | || || | ||| ||||| ||||| || || ||||| Sbjct 555688 ATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTT 555629 Query 138519 GTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 ||| ||| ||| ||| | | || | ||||||| | | ||||||||| | || | Sbjct 555628 GTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGAT 555569 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||||||||| || || ||||| |||||||| Sbjct 555568 GGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533 >seq1721 Length=144067 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || || || | |||| | | ||| ||||| || || Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| |||||| || | | || | |||||| | | ||| ||| Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 117975 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | || || ||||| || ||||| ||||| ||||||||| Sbjct 117974 TCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 117927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496226309316960