Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq755 179 4e-40
seq1980 95.1 1e-14
seq1721 86.0 6e-12
>seq755
Length=318311
Score = 179 bits (198), Expect = 4e-40
Identities = 484/728 (66%), Gaps = 32/728 (4%)
Strand=Plus/Plus
Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122
||||||| | |||||||||||||| ||||| | | || | |||||||||| | |
Sbjct 109875 GGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGG 109934
Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182
||||| |||||||||||||| || ||||| || || | || || ||||| ||||
Sbjct 109935 CCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 109994
Query 146183 CCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCC---GTAGTTTGGACCAAT 146239
||||| ||| |||||||||| | | ||||| ||| | || || ||| |
Sbjct 109995 GCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTT---CCAGT 110051
Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC---GCGGA 146296
||||| | || || || | | | ||||||| |||| |||| || ||
Sbjct 110052 CCCACA---GGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGA 110108
Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGC---CAGTTCGCAGC 146353
||| || |||||||| || || || ||| | || ||| ||| |||||||
Sbjct 110109 CTGGGGAGCC---CTCGTACGTCTCGTAGGGGCCG---AACTCGGCTGCCAGCTCGCAGC 110162
Query 146354 TAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCC 146412
| || |||||||| | |||| |||||||| ||| | ||||| || ||| |||
Sbjct 110163 TCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGA-GCAGCTGAGCC 110221
Query 146413 TCCTCGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCG 146472
|| ||| || | ||| | | || | |||||||| || | ||| || | |||
Sbjct 110222 TCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCG 110281
Query 146473 ACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCG-CAGTGGGATAGTGGTT 146531
| || | || | ||| |||||| ||| |||| | | || |||| |||| |||
Sbjct 110282 ATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGG-TAGTAGTT 110340
Query 146532 GCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGT--CAAACGATTCAGCAGG 146589
| ||||||| |||||||| || || |||| | ||| || || ||| |||
Sbjct 110341 GATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGC--CAGTTTT 110398
Query 146590 ACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAG 146649
| ||||||| || | | ||||| || |||||| |||||| |||||||
Sbjct 110399 TTAAAGTCAAAAGTCCGC---TCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGA 110455
Query 146650 TTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTG 146709
||||| || || |||||| | | | || | || || || | |||||||||||||
Sbjct 110456 TTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTG 110515
Query 146710 CACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGC 146769
||||||||| |||||| ||| | ||||| || | ||||||||| ||| ||||| |||
Sbjct 110516 CACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGC 110575
Query 146770 ATGTACGG 146777
||||||||
Sbjct 110576 ATGTACGG 110583
>seq1980
Length=102293
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739
|||| || ||||| | ||| || |||||| | |||||| |||||| ||||| |||||
Sbjct 5475 TACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGTTG 5534
Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
|| | ||||||||| |||||| ||||||||||| ||| |||||||||
Sbjct 5535 CTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTC 5584
>seq1721
Length=144067
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || || |||||||| || ||||| || | ||||| |
Sbjct 118370 CGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 118311
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||| | | |||||| || || || ||||||||||||
Sbjct 118310 TCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTG 118251
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| || ||||| | || | |||||| | |||||| || | ||| |
Sbjct 118250 TCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 118191
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || || || || || || ||||||||
Sbjct 118190 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475466219204320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |