Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq755 179 4e-40 seq1980 95.1 1e-14 seq1721 86.0 6e-12 >seq755 Length=318311 Score = 179 bits (198), Expect = 4e-40 Identities = 484/728 (66%), Gaps = 32/728 (4%) Strand=Plus/Plus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122 ||||||| | |||||||||||||| ||||| | | || | |||||||||| | | Sbjct 109875 GGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGG 109934 Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182 ||||| |||||||||||||| || ||||| || || | || || ||||| |||| Sbjct 109935 CCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 109994 Query 146183 CCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCC---GTAGTTTGGACCAAT 146239 ||||| ||| |||||||||| | | ||||| ||| | || || ||| | Sbjct 109995 GCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTT---CCAGT 110051 Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC---GCGGA 146296 ||||| | || || || | | | ||||||| |||| |||| || || Sbjct 110052 CCCACA---GGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGA 110108 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGC---CAGTTCGCAGC 146353 ||| || |||||||| || || || ||| | || ||| ||| ||||||| Sbjct 110109 CTGGGGAGCC---CTCGTACGTCTCGTAGGGGCCG---AACTCGGCTGCCAGCTCGCAGC 110162 Query 146354 TAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCC 146412 | || |||||||| | |||| |||||||| ||| | ||||| || ||| ||| Sbjct 110163 TCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGA-GCAGCTGAGCC 110221 Query 146413 TCCTCGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCG 146472 || ||| || | ||| | | || | |||||||| || | ||| || | ||| Sbjct 110222 TCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCG 110281 Query 146473 ACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCG-CAGTGGGATAGTGGTT 146531 | || | || | ||| |||||| ||| |||| | | || |||| |||| ||| Sbjct 110282 ATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGG-TAGTAGTT 110340 Query 146532 GCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGT--CAAACGATTCAGCAGG 146589 | ||||||| |||||||| || || |||| | ||| || || ||| ||| Sbjct 110341 GATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGC--CAGTTTT 110398 Query 146590 ACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAG 146649 | ||||||| || | | ||||| || |||||| |||||| ||||||| Sbjct 110399 TTAAAGTCAAAAGTCCGC---TCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGA 110455 Query 146650 TTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTG 146709 ||||| || || |||||| | | | || | || || || | ||||||||||||| Sbjct 110456 TTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTG 110515 Query 146710 CACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGC 146769 ||||||||| |||||| ||| | ||||| || | ||||||||| ||| ||||| ||| Sbjct 110516 CACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGC 110575 Query 146770 ATGTACGG 146777 |||||||| Sbjct 110576 ATGTACGG 110583 >seq1980 Length=102293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| || ||||| | ||| || |||||| | |||||| |||||| ||||| ||||| Sbjct 5475 TACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGTTG 5534 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || | ||||||||| |||||| ||||||||||| ||| ||||||||| Sbjct 5535 CTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTC 5584 >seq1721 Length=144067 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||| | || | || || |||||||| || ||||| || | ||||| | Sbjct 118370 CGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 118311 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || ||||| |||| | | |||||| || || || |||||||||||| Sbjct 118310 TCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTG 118251 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||||| | || | |||||| | |||||| || | ||| | Sbjct 118250 TCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 118191 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || || || || |||||||| Sbjct 118190 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475466219204320