Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq755 178 1e-39
seq1721 89.7 5e-13
>seq755
Length=318311
Score = 178 bits (196), Expect = 1e-39
Identities = 908/1433 (63%), Gaps = 30/1433 (2%)
Strand=Plus/Minus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
|| || ||||| ||| || || ||||||||| | || | |||| | ||| |
Sbjct 111306 AAAGTGGCCGAGCGTCCGCAGCACATGCTCATGAGGGTGTCCGTAGGAATCCACAAAACG 111247
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|||||||| || | ||| || ||| | || |||| | || | ||||| |||||
Sbjct 111246 GACATCGATGCAGCCATCGAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCC 111187
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
|| ||| | ||| ||| || || || ||| ||| |||| || || |||||
Sbjct 111186 TCCCCGACTCTCTTCAACGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTC 111127
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137
|| || || ||||||||| || |||||||| ||| || | || || | ||
Sbjct 111126 GCCATGAAAGACGACAGCATCGAAGGCATCTATGACACTCTGAAGCAGTGTGCCCTCATC 111067
Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197
||||| | | || ||||| || ||| || | | | ||| | |||||| |
Sbjct 111066 TCCAAGTCGGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCCACAGGAAGCTAC 111007
Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257
||| | ||| | || | | || |||||||| |||||||| |||||||||| |||
Sbjct 111006 ATCTCTGGTACCAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAAC 110947
Query 123258 GCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATCTA 123314
| | ||| ||||||||||||| ||||| | | || || | || || || |
Sbjct 110946 ACGGCGCGTTACGTCGACCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGTACTTG 110887
Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374
|| ||||||||| |||| |||| ||| || | | | || |||| || |||
Sbjct 110886 GAGCCGTGGCACTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAAAGGAG 110827
Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434
|| ||| ||| | || | || ||||| | ||| | |||||| |||| ||| |
Sbjct 110826 GAGCAGAGGGCCAGAGACCTTTTCTACGCCCTTTGGATCCCCGATCTGTTCATGAAGAGG 110767
Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494
|| | | || | ||||| || ||||||||| | ||||| || || |||
Sbjct 110766 GTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGTCCTGGACTGGACGAG 110707
Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAA--CAGG 123552
| || | ||||||| ||| | ||| | || ||| ||||| | || |
Sbjct 110706 TGCTGGGGGGAGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGGCCAAG 110647
Query 123553 TTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCG 123612
|| ||| ||| | | ||| | || ||||| | || || || |
Sbjct 110646 CGTGT--GGTGAAGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACGG 110589
Query 123613 GAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGG 123672
| |||||||||||||| ||||||||||||||||||||||| | ||| ||| || |||
Sbjct 110588 GTACGCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 110529
Query 123673 GAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA---CAGCGATGCCGATC 123729
| || || || || || || || ||| | ||||| ||||||| |||| ||| ||
Sbjct 110528 GCACCATCAAGTGCAGCAACCTCTGCACAGAAATCGTCGAATACACCAGCCATGACG--- 110472
Query 123730 AAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCG--- 123786
| || || || |||||| |||| || || | | || | |||| | ||| |
Sbjct 110471 AGGTAGCGGTCTGTAATCTGGCCTCCATCGCCCTCAACATGTACGTC-ACCCCGGAGCGG 110413
Query 123787 -CTTTTAATTTCCAAACGCT--CAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843
||||| | || ||| || | | | | || ||| | || || || ||||||
Sbjct 110412 ACTTTTGACTTTAAAAAACTGGCGTATG--TCACCAAAGTAATCGTCAAAAACCTGAACA 110355
Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGC-GCGTTTGTCTAATTTGAAACAC 123902
| |||||||| | || | || || || ||||| | | | || || | |||
Sbjct 110354 AGATTATCGACATCAACTACTACCCAGTGCCTGAAGCTGAGAAT-TCCAACAAGCGCCAC 110296
Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962
|| ||| ||||| | || | ||||| || || ||||| || | | |||| |||
Sbjct 110295 AGGCCGATCGGAATCGGAGTGCAAGGTTTAGCAGACGCCTTCATCCTCATGCGTCACCCG 110236
Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022
| |||||| ||| || || |||| || | || || ||| || || || ||||
Sbjct 110235 TTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTCGAGACCATCTACTACGCT 110176
Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGGG 124081
||| |||||||||||||||| || || | | | |||| | ||||| | |||| |||
Sbjct 110175 GCTCTGGAGGCGAGCTGCGAGCTGGCAGCCGAGT-TCGGCCCCTACGAGACGTACGAGGG 110117
Query 124082 CAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTT 124141
| ||| | ||| || || ||||||||||||||||| | || ||||| | |
Sbjct 110116 CTCCCCAGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACGCCGACCGACCT 110057
Query 124142 GTGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCGCTG 124199
||||||||||| | | || | | | |||| | |||| || | ||| |||
Sbjct 110056 GTGGGACTGGAAGCTGCTGAAGGA--GAAGATCGCCAAAAACGGCGTGAGGAACAGCCTG 109999
Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259
|| |||| ||||| || || |||| || || || | || |||||||| ||| ||
Sbjct 109998 CTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGTAACAACGAGTCCATC 109939
Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCA 124312
||| | | ||| | ||| | ||| || | || | ||||||| |||||
Sbjct 109938 GAGGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCCGGCGAGTTTCA 109886
>seq1721
Length=144067
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| ||||| || || ||| || ||| ||| |||
Sbjct 118136 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 118077
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || ||| | ||||| | |||||||| || ||||||||||| || || ||
Sbjct 118076 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 118017
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| |||| || | |||||| | |||||| ||||| || | || |||
Sbjct 118016 ATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 117957
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||| ||||| || |||||
Sbjct 117956 CCAGTGAGGGTTTTCACAAAGATCTGCAT 117928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451970328067280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |