Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq755 178 1e-39 seq1721 89.7 5e-13 >seq755 Length=318311 Score = 178 bits (196), Expect = 1e-39 Identities = 908/1433 (63%), Gaps = 30/1433 (2%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 || || ||||| ||| || || ||||||||| | || | |||| | ||| | Sbjct 111306 AAAGTGGCCGAGCGTCCGCAGCACATGCTCATGAGGGTGTCCGTAGGAATCCACAAAACG 111247 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| || | ||| || ||| | || |||| | || | ||||| ||||| Sbjct 111246 GACATCGATGCAGCCATCGAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCC 111187 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || ||| | ||| ||| || || || ||| ||| |||| || || ||||| Sbjct 111186 TCCCCGACTCTCTTCAACGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTC 111127 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||||||||| || |||||||| ||| || | || || | || Sbjct 111126 GCCATGAAAGACGACAGCATCGAAGGCATCTATGACACTCTGAAGCAGTGTGCCCTCATC 111067 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197 ||||| | | || ||||| || ||| || | | | ||| | |||||| | Sbjct 111066 TCCAAGTCGGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCCACAGGAAGCTAC 111007 Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257 ||| | ||| | || | | || |||||||| |||||||| |||||||||| ||| Sbjct 111006 ATCTCTGGTACCAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAAC 110947 Query 123258 GCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATCTA 123314 | | ||| ||||||||||||| ||||| | | || || | || || || | Sbjct 110946 ACGGCGCGTTACGTCGACCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGTACTTG 110887 Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374 || ||||||||| |||| |||| ||| || | | | || |||| || ||| Sbjct 110886 GAGCCGTGGCACTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAAAGGAG 110827 Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434 || ||| ||| | || | || ||||| | ||| | |||||| |||| ||| | Sbjct 110826 GAGCAGAGGGCCAGAGACCTTTTCTACGCCCTTTGGATCCCCGATCTGTTCATGAAGAGG 110767 Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494 || | | || | ||||| || ||||||||| | ||||| || || ||| Sbjct 110766 GTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGTCCTGGACTGGACGAG 110707 Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAA--CAGG 123552 | || | ||||||| ||| | ||| | || ||| ||||| | || | Sbjct 110706 TGCTGGGGGGAGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGGCCAAG 110647 Query 123553 TTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCG 123612 || ||| ||| | | ||| | || ||||| | || || || | Sbjct 110646 CGTGT--GGTGAAGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACGG 110589 Query 123613 GAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGG 123672 | |||||||||||||| ||||||||||||||||||||||| | ||| ||| || ||| Sbjct 110588 GTACGCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 110529 Query 123673 GAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA---CAGCGATGCCGATC 123729 | || || || || || || || ||| | ||||| ||||||| |||| ||| || Sbjct 110528 GCACCATCAAGTGCAGCAACCTCTGCACAGAAATCGTCGAATACACCAGCCATGACG--- 110472 Query 123730 AAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCG--- 123786 | || || || |||||| |||| || || | | || | |||| | ||| | Sbjct 110471 AGGTAGCGGTCTGTAATCTGGCCTCCATCGCCCTCAACATGTACGTC-ACCCCGGAGCGG 110413 Query 123787 -CTTTTAATTTCCAAACGCT--CAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843 ||||| | || ||| || | | | | || ||| | || || || |||||| Sbjct 110412 ACTTTTGACTTTAAAAAACTGGCGTATG--TCACCAAAGTAATCGTCAAAAACCTGAACA 110355 Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGC-GCGTTTGTCTAATTTGAAACAC 123902 | |||||||| | || | || || || ||||| | | | || || | ||| Sbjct 110354 AGATTATCGACATCAACTACTACCCAGTGCCTGAAGCTGAGAAT-TCCAACAAGCGCCAC 110296 Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962 || ||| ||||| | || | ||||| || || ||||| || | | |||| ||| Sbjct 110295 AGGCCGATCGGAATCGGAGTGCAAGGTTTAGCAGACGCCTTCATCCTCATGCGTCACCCG 110236 Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022 | |||||| ||| || || |||| || | || || ||| || || || |||| Sbjct 110235 TTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTCGAGACCATCTACTACGCT 110176 Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGGG 124081 ||| |||||||||||||||| || || | | | |||| | ||||| | |||| ||| Sbjct 110175 GCTCTGGAGGCGAGCTGCGAGCTGGCAGCCGAGT-TCGGCCCCTACGAGACGTACGAGGG 110117 Query 124082 CAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTT 124141 | ||| | ||| || || ||||||||||||||||| | || ||||| | | Sbjct 110116 CTCCCCAGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACGCCGACCGACCT 110057 Query 124142 GTGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCGCTG 124199 ||||||||||| | | || | | | |||| | |||| || | ||| ||| Sbjct 110056 GTGGGACTGGAAGCTGCTGAAGGA--GAAGATCGCCAAAAACGGCGTGAGGAACAGCCTG 109999 Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259 || |||| ||||| || || |||| || || || | || |||||||| ||| || Sbjct 109998 CTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGTAACAACGAGTCCATC 109939 Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCA 124312 ||| | | ||| | ||| | ||| || | || | ||||||| ||||| Sbjct 109938 GAGGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCCGGCGAGTTTCA 109886 >seq1721 Length=144067 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||| || ||| ||| ||| Sbjct 118136 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 118077 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | ||||| | |||||||| || ||||||||||| || || || Sbjct 118076 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 118017 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| |||| || | |||||| | |||||| ||||| || | || ||| Sbjct 118016 ATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 117957 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| ||||| || ||||| Sbjct 117956 CCAGTGAGGGTTTTCACAAAGATCTGCAT 117928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451970328067280