Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq1056 105 1e-17 seq286 102 1e-16 seq570 91.5 2e-13 >seq1056 Length=264320 Score = 105 bits (116), Expect = 1e-17 Identities = 195/279 (70%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 9415 TTTCTACCACCACTAATCCGACCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCT 9474 |||||| || || | ||| || |||||||| | ||||||| || || | | | | Sbjct 41735 TTTCTAACAGTTCTTACCCGTCCTGCAATCTGCTTGCTGAACGACTCCACCAGGTTGCCG 41676 Query 9475 ATTCCGTGCTTGATGAGGATGGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCG 9534 || ||||||| | | | || ||||| | || || |||| ||| | || | || | Sbjct 41675 ATGCCGTGCTCAGTCACTACAGAGGTGTTGAACACAAACTGTTTGTAGCTGTAGT-CG-G 41618 Query 9535 TCGCCT--ATGCGAAAATCATCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACT 9592 || ||| ||| | || ||||||| ||||| |||||| |||| ||||| || |||| Sbjct 41617 TCTCCTCGATGTGGAAGCTGTCAGGCATCAGAGGGTGCCAGTGGTACAGGGTGTTAAACT 41558 Query 9593 CGGCCGCTATTCGGTTCTGGTACTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAA 9650 | | || || |||||||||||||| ||| || ||| || || | ||| |||||||| Sbjct 41557 CAGATGCAATGCGGTTCTGGTACTGGAAGCGCTGGT--TAAAGAGCAGCTCGGGGTCAAA 41500 Query 9651 GATTAGCTGGAAGTGGTACCCGCTGAGTTGCTGGACATA 9689 | |||| |||||| || ||||| || ||||| || || Sbjct 41499 CTTGAGCTTGAAGTGATAGCCGCTCAGGTGCTGCACGTA 41461 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995 ||||| || ||||||| || || |||| || || ||||||||||| ||||||||| || Sbjct 42842 GCGGTGTTGACGATGTTGAAGCCCACGTTGCCTCCAAAGGTGCTGGGCTTCCAGTACTCC 42783 Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055 || ||||||||| || |||| | || || | ||| || || ||||||| ||| | Sbjct 42782 GGAGAGCAGATGGGATTTCCCATTAAGCCCTTGAGGGAGAAAGGGGCCCCCATCTCCACC 42723 Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115 || |||| || |||||||| | | ||||| || || | | ||| | |||||| Sbjct 42722 ATCGTCTCCCCAAAGATGGCGTTCTGCCTGGGTTTCTCCACCAGCAGGCCCGGGTAGAGC 42663 Query 9116 TCGACAGCCTCGACGTCGCCATA 9138 || || || |||| || ||| || Sbjct 42662 TCCACGGCATCGATGTGGCCGTA 42640 >seq286 Length=612266 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 8942 TTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAG 9001 || || ||||| || || || | || |||||||||||||| |||||||| | || ||| Sbjct 498560 TTTACTATGTCAAAGCCGACTTTGCCTCCGAAGGTGCTGGGCTTCCAGTAATCTGGAGAG 498501 Query 9002 CAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTC 9061 || || ||| ||| ||| ||||| | ||| || || || |||| ||| | ||||| Sbjct 498500 CATATAGGGTTTCCCAGGAGGCCTTTGAGGGAGAAGGGGGCGCCCATCTCCACCATGCTT 498441 Query 9062 TCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACA 9121 || ||||| |||| || || || | ||| || | || ||||| | || | |||| | Sbjct 498440 TCTCCGAATATGGACCCCGGTCGGGTTTTCTCCAACATCAAGCCGGGATAAAACTCGAGA 498381 Query 9122 GCCTCGACGTCGCCATAGA 9140 || || | |||||| |||| Sbjct 498380 GCGTCAATGTCGCCGTAGA 498362 >seq570 Length=446048 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 8939 GTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGG 8998 ||||| ||||||| || || || || |||||||||||||| |||||||| | ||| Sbjct 92019 GTTTTGACGATGTTGAAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTATTCAGGG 91960 Query 8999 GAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATG 9058 ||||||||| ||| || || || |||| ||| || ||||| || | ||| | ||| Sbjct 91959 GAGCAGATGGGGTTTCCCTGCAGACCCTTCAGGGAGAAGGGAGCACCGATCTCCACCATG 91900 Query 9059 CTCTCACCGAAGATGGCACCG-GGACGCG-GT-TTTTCGACGATGAAGCCAGTGTAGAGT 9115 |||||||| || ||| ||| | ||| || || || | |||| ||| | ||| | Sbjct 91899 CTCTCACCAAATATG---CCGTTCAAGCGAGTCTTCTCCAGCATGATGCCGGGGTAAAAC 91843 Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAA 9150 || | ||| || | ||| || ||||| | ||||| Sbjct 91842 TCCAGAGCATCTATGTCTCCGTAGAGTTCCTCCAA 91808 Score = 84.2 bits (92), Expect = 3e-11 Identities = 162/238 (68%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 9724 ATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTG 9783 ||||| || | ||||| || |||| |||||| || |||| || || || || Sbjct 87018 ATGATGAGTCTGGTGGTCTGGAACAGCTGCTCATCGTCCCAGCTGGGATGCTCAGCCTTC 86959 Query 9784 AGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCC 9843 || || || || || |||||||| || ||||||||||||||||||||||| | | ||| Sbjct 86958 AGGACGTCACACACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACATGGTGAGGCCC 86899 Query 9844 GGCACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCA---CTTCG 9900 |||| | || ||||| || | || | || | |||| | ||| | || | |||| Sbjct 86898 GGCAGGAGGCCGAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGGGAAGGCTTCA 86839 Query 9901 GGCGCATACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGT 9958 || || | ||| ||||| | ||| || || ||||| ||||| ||||||| Sbjct 86838 GG---GTAAACCATGTGCACGGGCACCTCAGACACCGTTGGGGGGTACATCTCACCGT 86784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723675366881200