Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq755 205 1e-47 seq1980 89.7 6e-13 seq35 82.4 9e-11 >seq755 Length=318311 Score = 205 bits (226), Expect = 1e-47 Identities = 840/1306 (64%), Gaps = 44/1306 (3%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | ||| | | |||| |||||||||| ||| ||||| |||||| Sbjct 109916 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAG 109975 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-----C 116017 ||||||||||| || |||| || |||||||| | ||| || | || | Sbjct 109976 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCT------CACGCCGTTTTTGGCGATC 110029 Query 116018 GT-TCCTTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073 | ||||| || | |||||| | || | | |||| | |||||||| || Sbjct 110030 TTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGTCG 110086 Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133 |||| ||||| || | | |||| || ||||| | ||||| || ||||| | Sbjct 110087 TACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCG 110146 Query 116134 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 | |||| ||| |||||||||| || || |||| || || ||||| || ||| | Sbjct 110147 GCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATG 110206 Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253 || | || |||||| | ||||||| | |||| | || || | || || Sbjct 110207 TTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCT 110266 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 | |||||| || |||| || || || | || | | | || || || ||| | Sbjct 110267 AAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGC 110326 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 || || || | || | ||||||| | | || || |||||| || || || |||| Sbjct 110327 ACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACA 110386 Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433 | || |||| | |||||| | || ||| |||| ||| | |||||| Sbjct 110387 TACGCCAGTTTTTTAAAGTCAAAAGTCCG---CTCCGGGGTGACGTACATGTTGAGGGCG 110443 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || ||||||||||| || | ||| || | ||||| || | ||||| || Sbjct 110444 ATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTG 110503 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 || | || | ||| |||||||||| |||| || || ||| |||| || || Sbjct 110504 CAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 110563 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 || ||||| ||||| || ||||| ||||||||||| || |||| || || || | ||| Sbjct 110564 TCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCAC 110623 Query 116614 A-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | | | | | || || || ||||| | ||| |||| ||| ||| | |||||||| Sbjct 110624 AGCTGCTGAGCCTTCACCACACGC-TTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAG 110682 Query 116673 GGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGG---TGCCTTATCTGGACAGA 116728 |||||||||| || ||| |||| ||| || || || || || ||||| | Sbjct 110683 CTCCTCAAACTCCTC-CCCCCAGCACTCGTCCAGTCCAGGACAGGCGTT---GGGACACA 110738 Query 116729 AGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786 |||||||| | || | ||| |||| ||||||||| || || |||||||| || Sbjct 110739 TCAGAGACCA--GTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAG 110796 Query 116787 CGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 116845 || |||| || || | | | ||| || | | || || || || ||| | Sbjct 110797 GGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCGA 110855 Query 116846 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTG 116901 ||||| | | || ||||||||| |||| ||||| |||| | || || Sbjct 110856 GGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCT 110915 Query 116902 CGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATG 116961 | | ||| |||||| || || | |||||| ||| | || | ||||| || | | Sbjct 110916 TGTTG-CCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACG 110974 Query 116962 ATACCATCAGATTGGCCATTTGT-CCCCCGAATACGAGACTTGTTGGCTCTGACATCGTG 117020 | || | || | |||||| || || || | | || ||| ||||| | Sbjct 110975 AGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTG-TGGATCTGATGCAGCT 111033 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 || || ||| || || || ||| |||| ||||| | || |||| | | ||| || | Sbjct 111034 GACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTC 111093 Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140 ||||| || ||||| ||| | || | |||| ||||||||||| |||| ||||| Sbjct 111094 ATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGG 111153 Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186 ||| || |||||||||||||| || || | |||||| ||||| Sbjct 111154 CCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC 111199 >seq1980 Length=102293 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | ||||| | |||||||||| |||| ||| || || ||||| Sbjct 4482 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCCAGGATCTGAGCAGTGGAA 4541 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||||| || |||| || |||||||| Sbjct 4542 GCTGTGGGCATCGGAGCCAAAAGCAGGCTGTT 4573 >seq35 Length=1322159 Score = 82.4 bits (90), Expect = 9e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| || | | ||| || ||||| ||| || |||||| ||||| || || | ||||| Sbjct 415119 CCTCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCT 415178 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 | | ||| | || ||| |||||| |||||||||||||| ||||||||| Sbjct 415179 TTAGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACA 415228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613462582688880