Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq755 212 1e-49 seq905 91.5 2e-13 >seq755 Length=318311 Score = 212 bits (234), Expect = 1e-49 Identities = 585/886 (66%), Gaps = 18/886 (2%) Strand=Plus/Plus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 || ||||| || ||||| | ||| | |||||| | |||| || ||||||||| | Sbjct 110489 TCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTC 110548 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCG 205002 || | ||| |||| ||| ||||||| |||| ||||| | || ||||| |||| || ||| Sbjct 110549 TTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCG 110608 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059 || || | ||||| | |||||| |||| |||| | | |||||| Sbjct 110609 ATGA-TGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGC---CCTCCCTTCCTT 110664 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACC---GTACACGTCCATCAGCCCTGG 205116 ||| || | ||||| ||| || |||| || || | || |||||| | || || Sbjct 110665 CTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCA---GTCCAGG 110721 Query 205117 ACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAG 205176 ||| |||||||||||||||||||| ||| | | | |||||||| ||| ||||| Sbjct 110722 ACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAG 110781 Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236 ||| |||||| ||| |||| || || || | |||||| | || | ||| ||| Sbjct 110782 ATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTT 110841 Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCA 205295 ||| |||| || || ||| || | | ||| |||||||||||| || ||| ||| | Sbjct 110842 CTTCTTCAGCTCGAG-GAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGA 110900 Query 205296 TTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTC 205355 || || || |||||||| ||||||||||| || || | | | |||| |||||| Sbjct 110901 AGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTC 110960 Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAG 205415 |||||| || || || ||||||| | | || || || | |||| ||| | Sbjct 110961 TCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGG 111020 Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACT 205475 || | | | || ||| | || || || |||| |||||| ||| |||| |||| Sbjct 111021 ATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACT 111080 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 | ||||||| ||||||||| ||||| ||||| || | | ||| |||| Sbjct 111081 GCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGC 111140 Query 205536 AAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594 | ||||| |||| |||||| || |||| |||||| || ||| ||||||| |||| Sbjct 111141 TGGACAGCTGTGGC-CTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC 111199 Query 205595 CGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATA 205654 | |||||| || |||||||||| | | || | || ||| || Sbjct 111200 CACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATT 111259 Query 205655 CCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTG 205714 |||| || | |||||||| | ||| || || | ||| ||| | |||| | ||| Sbjct 111260 CCTACGGACACCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTC 111319 Query 205715 AGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGG 205760 | |||||||| | ||| || || || | | || |||||| ||| Sbjct 111320 AACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGG 111365 Score = 187 bits (206), Expect = 4e-42 Identities = 338/484 (70%), Gaps = 14/484 (3%) Strand=Plus/Plus Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 || || ||||||| ||||| ||| | ||| |||| || | ||||||||||||| Sbjct 109821 TCTTCATCTCCTCGTTCCACAGCCCCCTCTCTG-TCAGGTCTTTGAGCAGGTGGGGGTTG 109879 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | ||||||||| || |||||||| |||| |||||| | | |||| ||||| | | ||| Sbjct 109880 ACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 109939 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 | | ||||||||| || | ||||| |||||| ||| |||||||| || ||||| ||| Sbjct 109940 ATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 109999 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA-- 204368 ||| ||| | ||| |||| ||| || | | |||||| ||||||| || Sbjct 110000 AGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 110059 Query 204369 TCGCACTGGGT-TTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427 ||| | | || ||| ||||||||||| |||| | |||||| | ||||||||| | Sbjct 110060 TCGGTCGGCGTCTTC---TCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAG 110116 Query 204428 CCCTTGTACGTCGGATA-AGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGC 204486 |||| ||||||| || ||| || ||| ||||||||| ||| || ||| || Sbjct 110117 CCCTCGTACGTCTCGTAGGGGCCGA-ACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGC 110175 Query 204487 GTGATAGTACATGGTCTCAAAGATCTGAACGTTTA--ATCTGGCGGCCTCCGTTCCGTCA 204544 ||||| |||||||| ||||| || | ||| | | ||| ||||| | | ||| Sbjct 110176 AGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTG--AGCCTCGGGGCTTTCA 110233 Query 204545 AACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCAACGGT 204604 |||| ||| || | | || |||| || || || |||||||||||||| | ||| Sbjct 110234 AACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGC 110293 Query 204605 CTGT 204608 |||| Sbjct 110294 CTGT 110297 Score = 107 bits (118), Expect = 3e-18 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | ||||||| ||| || || || |||| Sbjct 109265 CCTGCTTCCAACCGTAGAAGTGCATGCTGGTTAGTTTGCCGTAGTTTGGCTCTGCGATGT 109324 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | |||||||| |||||||| ||||||||| | |||||| || || || ||||| || | Sbjct 109325 GGATGTTCAGGGACTGGCTCTGGTCGATGTA-GGCGCCGCGGTCGGCCGCCATCTTCAGT 109383 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||||||||| || || |||||||| || ||| Sbjct 109384 ATGGTCTTCTGGGAGATTTCCCACACGGTTTTG 109416 >seq905 Length=306118 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 200182 TTTGTTTACAGACTGGTTCCGGAGTACATGGACCCTGCAGGATGACCCTTGTAAAAAATA 200241 ||| | | |||| |||| ||| || || ||||| || || |||||||| ||||| | ||| Sbjct 120351 TTTATCTGCAGAGTGGTACCGAAGCACCTGGACGCTTCAAGATGACCCGTGTAAGAGATA 120292 Query 200242 TCACGAAGTGCTCATTATCAACCCCGTTCTATTAGTCCCTCCAACCAAGG 200291 | | ||||| ||||| |||||||| |||| | || ||||||||||||| Sbjct 120291 TTATGAAGTCCTCATGGTCAACCCCATTCTGCTGGTGCCTCCAACCAAGG 120242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795097372338080