Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 136 9e-27
seq210 134 3e-26
>seq1721
Length=144067
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 118140 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 118081
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || |||||||| | | ||||||||| || ||| ||||| ||
Sbjct 118080 TTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 118021
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||| || |||| |||||| | | || || || | ||||| ||
Sbjct 118020 CTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 117961
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 117960 CTTGCCAGTGAGGGTTTTCACAAAGATCTG 117931
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||||||||||||||| |||||||| |||| ||||||||||| | || | |||||
Sbjct 118596 CAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118537
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || |||||||| | | ||||||||| || ||||||||| ||
Sbjct 118536 CTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTC 118477
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 118476 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 118417
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || || || || ||
Sbjct 118416 CTTTCCAGTGAGGGTCTTGACGAAGATCTG 118387
Score = 104 bits (114), Expect = 6e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || || || ||||||| ||||||||||| | || | |||||
Sbjct 118368 CAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118309
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || || ||||| || | ||||||||| || ||| || || ||
Sbjct 118308 CTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 118249
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || || | |||||| | | || || || | ||||| ||
Sbjct 118248 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 118189
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || || || || ||
Sbjct 118188 CTTGCCAGTGAGGGTCTTGACGAAGATCTG 118159
Score = 93.3 bits (102), Expect = 1e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 109109 CAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 109050
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||||||||||| || |||||||| | | ||||||||| || ||| |||||
Sbjct 109049 CTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTC 108996
>seq210
Length=679747
Score = 134 bits (148), Expect = 3e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || |||||||| || ||||| || |||| ||||||||||| | ||| | |||||
Sbjct 555973 CAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATC 555914
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| || | ||||||||| ||| || || ||| ||
Sbjct 555913 TTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTC 555854
Query 199537 CTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595
||| || ||| || || ||| |||| ||||| | | || || |||| ||||| |
Sbjct 555853 CTGGAT-TTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGG 555795
Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| || ||||| || |||||||| || ||
Sbjct 555794 TCTTGCCGGTGAGGGTCTTCACAAAGATCTG 555764
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
||| | ||||||||| ||||| || ||||| || |||| ||||||||||| | || |
Sbjct 555751 AAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCG 555692
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||||||||||||||||| || || || || || | ||||||||| ||| || || ||
Sbjct 555691 ACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTC 555632
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
| ||||| |||||| ||||| || | |||||| | | || || |||| ||
Sbjct 555631 TTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGT 555572
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||||||| || | || |||||||| || ||
Sbjct 555571 GATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTG 555536
Score = 104 bits (114), Expect = 6e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| |||||||| || ||||| || |||| ||||||||||| | ||
Sbjct 556432 CGGAGACGCAGGACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTG 556373
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515
| ||||||||||||||||| || ||||| || ||||||||||||||
Sbjct 556372 CGACCATCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTC 556326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178833719499806
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