Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq25 163 2e-34 seq181 113 3e-19 seq575 95.1 9e-14 seq384 89.7 4e-12 >seq25 Length=1388224 Score = 163 bits (180), Expect = 2e-34 Identities = 931/1472 (63%), Gaps = 22/1472 (1%) Strand=Plus/Minus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| || |||| | ||| || ||||| |||||||| || | || || || || || | Sbjct 540194 TTTGTCGACGGCGGACACGTTCAGAATGCCATTGGCGTCGATGTCGAACGTTACCTCCAC 540135 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 || || || ||||| ||||||| ||||| ||| | | ||| | ||||| || Sbjct 540134 CTGTGGCACACCTCTGGGAGCAGGAGGGATACCTGTGAGCTCAAACTTGCCCAGTAGGTT 540075 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || ||||| || | || ||||| ||| | | ||||| || | | || || Sbjct 540074 GTTGTCTTTGGTCATGGCTCTCTCACCTTCGTACACCTGGATCAGCACACCTGGCTGGTT 540015 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487 ||||| || || | || | ||||| | | || | || ||||| ||||||| | | Sbjct 540014 GTCTGAGTAGGTGGAGAAAA-TCTGGGTCTGCTTGGAGGGGATTGTGGTGTTTCGCTTGA 539956 Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 | | | ||||||| |||||||| ||||| | || ||||| ||||||| || || | Sbjct 539955 TTAAAGGCGTCATAACTCCACCTGCAGTTTCGATGCCCAGAGACAGAGGAGCCACGTCCA 539896 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 || | | || || | || || ||| | || | || ||||| || || | | Sbjct 539895 GCAGCAGCAGATCCTGGACGTTCTCTGAAGTGTCGCCCATGAGGATAGCAGCCTGGACTG 539836 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 | || || || || || |||||||| || || | | | || || | | | ||||||| Sbjct 539835 CTGCTCCGTAAGCCACGGCTTCATCTGGGTTGATGCTCTTGTTCAGGTCTCTGCCATTGA 539776 Query 517668 AAAAATT-TGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 |||| | || |||| ||| ||| | || ||||| | | || || || || | || Sbjct 539775 AAAAGTCCTGTAAGA-GTT-TCTGGATTTTGGGAATTCTGGTGGAGCCACCGACCAGGAC 539718 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 517785 ||||||||| |||| || || |||||||| | ||| | | || ||||| || || Sbjct 539717 AATTTCATGGACCTTGGACTTGTCCAGTTTGGCATCTTGCAGGGCCTTCTCAACTGGCTC 539658 Query 517786 AAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 517845 || | || || | || ||| || || || || || || || || ||| Sbjct 539657 CAGTGTTCCCCTGAAGAGCTCCGAATTGAGCTCCTCAAACCGTGCCCTTGT--GATTGAA 539600 Query 517846 AT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 517903 | || || |||||||| || |||| ||| || | || || | | || || || Sbjct 539599 GTGTAAAAGTCAATTCCCTCAAACAGAGAGTCGATCTCGATGTTGGCCTGTGTGCTGGAT 539540 Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT 517963 || | | | || || | ||||| ||||| | ||||| | | ||| | || || Sbjct 539539 GACAAGGTCCTCTTTGCTCTCTCACAAGCTGTGCGCAGTCTCCTCACCGCTCT--CTTAT 539482 Query 517964 --TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGAC 518021 || | | || | || | |||||| || || || || || | | || | | Sbjct 539481 TATGGCTGATGTCCTTCTTGTGTTTTCTTTTAAATTCCTCTACGAAGTGGTTGACCATGC 539422 Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081 | || ||||| || || || || | | || | ||||| || ||| | || | || | Sbjct 539421 GGTTGTCAAAGTCCTCCCCACCAAGGTGTGTGTCTCCTGCGGTGGCTTTCACCTCAAAGA 539362 Query 518082 GTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 || || || | | || | | || ||| ||| || ||||| | |||||| || | Sbjct 539361 TGCCGTCCTCGATGGTCAGGATGGACACGTCAAAGGTGCCGCCACCGAGATCAAAGATGA 539302 Query 518142 GTACATTCATTTCTTTGTCTTGGTT---TTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198 | || || || | |||| || |||||| || ||||| |||| || || || | Sbjct 539301 GCACGTTGCGCTC-TCCTCTT--TTACCTTTATCCAGGCCATAGGCAATGGCTGCTGCTG 539245 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 | || ||||| || || |||| |||||| || |||| || || ||||| || |||| Sbjct 539244 TGGGCTCATTGATGATCCTCAGAACATTTAGTCCAGAGATCACCCCGGCATCCTTGGTGG 539185 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCT 518317 |||||||||||||||| || || || || || || || || || || | | | | ||| Sbjct 539184 CTTGTCTTTGTGAATCATTGAAGTAAGCCGGCACTGTGATGACTGCGTTCGACACCCTCT 539125 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 | || | || || || | | |||||| ||| | | ||| || |||| | Sbjct 539124 GT-CCCAGGTAGGCCTCAGCTATCTCTTTCATCTTAACCAGGACCATGGAGGAAACCTCC 539066 Query 518378 TCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 || || | | ||||| || | ||| || | | | || || | Sbjct 539065 TCAGGATAGAACGCCTTGGTCTCCCCCTTATAGTCCACCTGGACTTTGGGCTTTCCATTG 539006 Query 518438 ACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAA 518497 || | || || || || |||||| |||||| || || || ||| |||| || || Sbjct 539005 TCACTGATCACCTTGAAAGGCCAGAGTTTCATGTCGGACTGGACAACCGGGTCGTTGAAG 538946 Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 | ||| || || | ||||| || ||||| | || |||||||| || || || |||| Sbjct 538945 TTTCTTCCGATGAGCCGTTTGGCGTCAAAGACTGTGTTGGTTGGGTTCATGGCGACTTGG 538886 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 518617 | ||||| || |||||||| || | ||||| ||||| || | ||||| ||||| Sbjct 538885 TTCTTGGCGGCGTCTCCAATGAGCCGCTCTGTGTCTGTGAAGGCCACATAGCTGGGAGTG 538826 Query 518618 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 518677 || | || || || || || || || || || ||||| |||| || | || || || Sbjct 538825 GTCCTGTTGCCCTGGTCGTTGGCGATTATCTCCACTTTGCCATGCTGGAAAACCCCAACG 538766 Query 518678 CAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 || | | || || || | ||| || ||||| Sbjct 538765 CAGGAATAGGTGGTGCCCAGATCGATGCCAAT 538734 >seq181 Length=707246 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||| | ||||| || | ||| || ||||| || ||||||||||||||||| ||| Sbjct 106196 TTCTTATCCAAGCCATAAGCGATAGCTGCTGCAGTGGGCTCATTAATAATTCTCAACACA 106137 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||||| || |||| |||||||| || ||||| | ||| || || || || || Sbjct 106136 TTTAGACCAGAGATAGTTCCAGCATCTTTGGTTGCTTGACGTTGAGAGTCATTGAAGTAG 106077 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| || || ||||| |||| Sbjct 106076 GCAGGTACCGTGATAACAGCAT 106055 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 518509 TAATCGTTT-TGCAT--CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 |||||||| ||| | |||| | || ||||| || || || ||| | |||| ||||| Sbjct 90996 TAATCGTTCATGCTTACCAAAGACTGTGTTGGTGGGGTTCATGGCAACCTGATTCTTGGC 91055 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||||||| ||||| || || ||||| || | ||||| || || || | || Sbjct 91056 TGCATCTCCTATCAGCCTCTCAGTATCTGTGAAGGCCACATAGCTGGGTGTGGTCCTGTT 91115 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || ||||| ||||| ||||||||||| |||| || | ||||| ||||| Sbjct 91116 GCCCTGGTCATTGGCAATGATTTCAACTTTGCCATGCTGGAACACACCAACACA 91169 >seq575 Length=385205 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || ||||| |||| |||||||||||| ||||| || || || | | ||| Sbjct 326118 TTTTTGTCCAGGCCATAAGCAATAGCAGCAGCAGTGGGTTCGTTGATGATACGAAGGACA 326177 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||| |||| ||| | ||||||||||| ||||| || | || || || || || || Sbjct 326178 TTAAGGCCAGAGATTGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTAG 326237 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| || || | || |||| Sbjct 326238 GCAGGCACGGTCACTACAGCAT 326259 >seq384 Length=497998 Score = 89.7 bits (98), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||| || ||||| ||||||||||| | |||||| || || ||||| ||||| || Sbjct 330055 GCAGACACGTTGAGAATGCCATTGGCATCAATATCAAAGGTCACCTCAATCTGAGGAACT 330114 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||||||||| || || | | ||| | ||||| |||||||||| ||| Sbjct 330115 CCTCTGGGAGCAGGTGGAATACCAGTGAGTTCAAACTTCCCCAGGATATTATTATCCTTA 330174 Query 517379 GT 517380 || Sbjct 330175 GT 330176 Score = 89.7 bits (98), Expect = 4e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || ||||| |||| || |||||||| || ||||| || || | || ||| Sbjct 331250 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTAGGCTCATTGATGATGCGCAGCACA 331309 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||| || || |||||||| |||||||| | || || || || || || Sbjct 331310 TTCAGCCCAGAGATGGCACCAGCATCTTTGGTGGCTTGACGCTGGGAGTCATTGAAGTAA 331369 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||||||||| || || |||| Sbjct 331370 GCAGGAACAGTGATGACTGCAT 331391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780533691675508