Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq755 210 3e-49 seq1980 91.5 2e-13 >seq755 Length=318311 Score = 210 bits (232), Expect = 3e-49 Identities = 961/1491 (64%), Gaps = 56/1491 (4%) Strand=Plus/Plus Query 105841 CTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGAC 105900 |||||| |||| | ||| || || ||| | || || |||| || || |||||| Sbjct 109822 CTTCATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGAC 109881 Query 105901 AATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAA 105960 ||| |||||| || | || || | |||||||| | ||||||| || | Sbjct 109882 GATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGAT 109941 Query 105961 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 106020 | | || || ||||||| ||| || |||||||||||||| ||||| || |||| || || Sbjct 109942 GGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAG 110001 Query 106021 ACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 106079 ||||| | | || |||| ||| ||||| || | | |||||| | | Sbjct 110002 GCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 110061 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGGAGAACC 106137 | | || || || ||||||| || | || || | |||||| ||| ||||| || Sbjct 110062 GGTCGGCGTCTTCT-CCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAG--CC 110118 Query 106138 CTCAAATGTCTCATAGGAACCT---TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGA 106194 ||| | ||||| |||| || | |||| |||| || |||||||||||||| | Sbjct 110119 CTCGTACGTCTCGTAGGGGCCGAACTCGGCT---GCCAGCTCGCAGCTCGCCTCCAGAGC 110175 Query 106195 TGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA 106254 |||| || ||||| || ||||| | || | | || || || ||||| Sbjct 110176 AGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAA 110235 Query 106255 TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCT 106314 | || || | || || | || || | |||||| || || | || || || || Sbjct 110236 CGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCT 110295 Query 106315 GTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGAC 106371 ||| ||| | || || || | ||| ||| || || || | || |||| || | Sbjct 110296 GTGGCGCTTGTTGGAATT---CTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAAT 110352 Query 106372 TCGGTTTAGATTTTTGGTAACAAT--CTTTG-TGATTTCATGAAGTTTTTCATAATCAAA 106428 ||| || |||||| || || ||||| ||| | ||||||| | | ||||| Sbjct 110353 CTTGTTCAGGTTTTTG---ACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAA 110409 Query 106429 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 106488 ||| || ||| |||| ||| | |||||||| || |||| ||| || || || Sbjct 110410 AGTCCG---CTCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGC 110466 Query 106489 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGT 106548 ||| || | ||||| || | |||||||| || | |||| | ||| || || Sbjct 110467 TACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGT 110526 Query 106549 CCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 106608 |||| ||||| ||||| ||||| ||||||| || || ||||| |||||||| ||||| Sbjct 110527 GCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGT 110586 Query 106609 CCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG 106667 |||||||||||||| |||| || || || | ||||| | | | | || || | Sbjct 110587 ACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACG 110646 Query 106668 CGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 106727 | ||||||| || ||| ||| ||| | |||||||| | ||||||||||| ||| | | Sbjct 110647 C-TTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTC-CCCCCAG 110704 Query 106728 C-GTCGGAGAGACCTGG---TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT-- 106781 | ||| || || || || ||| ||||| | |||||||| | || | Sbjct 110705 CACTCGTCCAGTCCAGGACAGGCGTTG---GGACACATCAGAGACCA--GTCCTGGTTGC 110759 Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841 ||| |||| ||||||||| || || || ||||| |||| | || || ||||| || Sbjct 110760 TCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCC 110819 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGC 106900 ||| || | ||| ||| || | | ||| ||||| || | | || |||| Sbjct 110820 TCTGCTCCTCCTTTCCTGTGTT-CTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGC 110878 Query 106901 CATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATA 106956 || ||||| | || | |||| | ||| || | | | ||| | || | || || Sbjct 110879 CACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTG-CCACCCTGGTCGACGTA 110937 Query 106957 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 107016 ||||| ||| ||| | || | ||||| || | | || | || | ||||| || Sbjct 110938 ACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGT 110997 Query 107017 CCCCCGAATACGAGATTTAT-TGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCC 107073 || || || || | ||| ||| | || | || || || || || || Sbjct 110998 -ACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGC--TGACCGCCACACCGATGCCTCC 111054 Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133 |||| |||| ||||| | ||||||| | | ||||| ||||||| || | ||| ||| Sbjct 111055 AGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTC 111114 Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 107193 || || |||||| |||||||| ||||||| ||| || || || ||||| ||||| Sbjct 111115 GTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAA 111174 Query 107194 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 107252 ||| || || | ||||| ||||| || | | |||| | || ||| ||||| | | Sbjct 111175 GAGAGTCGGGGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAGGTTGTAGGTCTCGATGG 111233 Query 107253 CAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | | ||| ||||| |||||| || | || ||| | ||| | ||||| Sbjct 111234 CTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATGT 111284 >seq1980 Length=102293 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || |||||||||| || ||||| |||| ||| || || || || Sbjct 5459 CTCATCTTTGCTGGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 5518 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || ||| | ||||| ||||| ||||||| || ||||| ||||||||||| || ||||| Sbjct 5519 CAGATTTTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCC 5578 Query 106612 CGTCTCCGTCTGTGACTTGA 106631 || || |||||||||| || Sbjct 5579 GGTTTCTGTCTGTGACTCGA 5598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589937893646320