Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq210 122 6e-23 seq1721 113 3e-20 >seq210 Length=679747 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | || |||| ||| | ||| |||||||| ||||| ||||| || Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || |||||||| || || | |||||||| | || Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||| ||||| || || ||||||| | || | || | || ||| || Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACC 555808 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| || || ||||| |||||||||||||||||||| Sbjct 555807 TCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| || ||| | || |||| |||||||| || || |||||| Sbjct 555723 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAAT 555664 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | |||||| ||||| ||||| ||| || Sbjct 555663 ATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTC 555604 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | || | || ||| || || | ||| ||||| || || || | ||||||||| Sbjct 555603 TCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACA 555544 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 555543 AAGATCTGCATCTT 555530 >seq1721 Length=144067 Score = 113 bits (124), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | || || | ||| | ||| |||||| || ||||| ||||| || Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || || ||||| || || | |||||||| | || Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||||||||| ||||| ||||| || || || | |||| || ||| | Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGA 118205 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | ||| ||||| || || ||||| ||||| || |||||||||||| Sbjct 118204 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 118155 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | || || | ||| | ||| || ||||| ||||| ||||| || Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || || || || || | | |||||||| | || Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| || || ||||| || || || | |||| || ||| | Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGA 117977 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTA 34988 | |||| ||| ||||| || || ||||| || ||||||||||||||||| || ||| Sbjct 117976 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTTTGTA 117921 Score = 100 bits (110), Expect = 2e-16 Identities = 169/243 (70%), Gaps = 9/243 (4%) Strand=Plus/Minus Query 34747 AATCATTT-----CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAAT 34801 |||||||| || ||||||| | || || | ||| | ||| || ||||| || Sbjct 118623 AATCATTTATTGACCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGAT 118564 Query 34802 GTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTG 34861 ||| ||||| || ||| | || |||| |||||||| || || || || || | | || Sbjct 118563 GTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTG 118504 Query 34862 CTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGAT 34919 |||||| | || | || |||||||| ||||| ||||| || || || | Sbjct 118503 CTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTG 118446 Query 34920 TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGC 34979 || | || |||||| || | ||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct 118445 TCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGC 118386 Query 34980 ATA 34982 ||| Sbjct 118385 ATA 118383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324610581245904