Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq210 122 6e-23
seq1721 113 3e-20
>seq210
Length=679747
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| | || |||| ||| | ||| |||||||| ||||| ||||| ||
Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || |||||||| || || | |||||||| | ||
Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||| ||||| || || ||||||| | || | || | || ||| ||
Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACC 555808
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || ||||| || || ||||| ||||||||||||||||||||
Sbjct 555807 TCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||||| ||||| || ||| | || |||| |||||||| || || ||||||
Sbjct 555723 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAAT 555664
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | |||||| ||||| ||||| ||| ||
Sbjct 555663 ATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTC 555604
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
|||| | || | || ||| || || | ||| ||||| || || || | |||||||||
Sbjct 555603 TCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACA 555544
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 555543 AAGATCTGCATCTT 555530
>seq1721
Length=144067
Score = 113 bits (124), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| |||||| || ||||| ||||| ||
Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || | |||||||| | ||
Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | |||| || ||| |
Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGA 118205
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || | ||| ||||| || || ||||| ||||| || ||||||||||||
Sbjct 118204 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 118155
Score = 100 bits (110), Expect = 2e-16
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || || || || | | |||||||| | ||
Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| || |||||||| || || ||||| || || || | |||| || ||| |
Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGA 117977
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTA 34988
| |||| ||| ||||| || || ||||| || ||||||||||||||||| || |||
Sbjct 117976 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTTTGTA 117921
Score = 100 bits (110), Expect = 2e-16
Identities = 169/243 (70%), Gaps = 9/243 (4%)
Strand=Plus/Minus
Query 34747 AATCATTT-----CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAAT 34801
|||||||| || ||||||| | || || | ||| | ||| || ||||| ||
Sbjct 118623 AATCATTTATTGACCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGAT 118564
Query 34802 GTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTG 34861
||| ||||| || ||| | || |||| |||||||| || || || || || | | ||
Sbjct 118563 GTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTG 118504
Query 34862 CTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGAT 34919
|||||| | || | || |||||||| ||||| ||||| || || || |
Sbjct 118503 CTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTG 118446
Query 34920 TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGC 34979
|| | || |||||| || | ||| ||||| ||||| ||||| ||||| || |||||||||
Sbjct 118445 TCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGC 118386
Query 34980 ATA 34982
|||
Sbjct 118385 ATA 118383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324610581245904
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