Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq25 138 9e-27
seq384 113 4e-19
seq575 104 2e-16
seq181 98.7 8e-15
>seq25
Length=1388224
Score = 138 bits (152), Expect = 9e-27
Identities = 438/674 (65%), Gaps = 4/674 (1%)
Strand=Plus/Plus
Query 551913 ACTGCTTGCGAAAGAGCCAA-ACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971
|| ||||| || ||||| || | || || | ||||| | || || ||| || || |
Sbjct 539508 ACAGCTTGTGAGAGAGCAAAGAGGACCT-TGTCATCCAGCACACAGGCCAACATCGAGAT 539566
Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031
|| || | |||||||||||||| | | | || | || | ||||| ||||| ||
Sbjct 539567 CGACTCTCTGTTTGAGGGAATTGACTTTTACACTTCAATCACAAGGGCACGGTTTGAGGA 539626
Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTC 552091
| ||| || ||||| || |||| | || ||||| || | | | |||| |
Sbjct 539627 GCTCAATTCGGAGCTCTTCAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTGCAAGATGC 539686
Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151
|| | || || ||||| || ||||||||||| || || ||||| || || ||||||||
Sbjct 539687 CAAACTGGACAAGTCCAAGGTCCATGAAATTGTCCTGGTCGGTGGCTCCACCAGAATTCC 539746
Query 552152 TAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210
||||| | || | ||| || ||| ||||||||| | | | | || | || | |
Sbjct 539747 CAAAATCCAGAAACTCTTACAGGACTT-TTTCAATGGCAGAGACCTGAACAAGAGCATCA 539805
Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAA 552270
| |||||||| || || || || || || ||| | || || ||||| || || | |
Sbjct 539806 ACCCAGATGAAGCCGTGGCTTACGGAGCAGCAGTCCAGGCTGCTATCCTCATGGGCGACA 539865
Query 552271 CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330
|| || || | || || | | || | || || ||||||| ||||| || | |
Sbjct 539866 CTTCAGAGAACGTCCAGGATCTGCTGCTGCTGGACGTGGCTCCTCTGTCTCTGGGCATCG 539925
Query 552331 AAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAA 552390
|||| | || || ||||||| | | ||| | |||| || || || || | ||
Sbjct 539926 AAACTGCAGGTGGAGTTATGACGCCTTTAATCAAGCGAAACACCACAATCCCCTCCAAGC 539985
Query 552391 AATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTG 552450
| | | | || || || || ||||| || || | | ||| || || | | |
Sbjct 539986 AGACCCAGATTTTCTCCACCTACTCAGACAACCAGCCAGGTGTGCTGATCCAGGTGTACG 540045
Query 552451 AAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTA 552510
|||| || ||| | || ||||| || || | ||| || | ||| | | |||||
Sbjct 540046 AAGGTGAGAGAGCCATGACCAAAGACAACAACCTACTGGGCAAGTTTGAGCTCACAGGTA 540105
Query 552511 TTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATG 552570
| ||||||||||| | || || || || | || || || ||||| ||||| |||||||
Sbjct 540106 TCCCTCCTGCTCCCAGAGGTGTGCCACAGGTGGAGGTAACGTTCGACATCGACGCCAATG 540165
Query 552571 GAATTTTGAATGTG 552584
| ||| |||| |||
Sbjct 540166 GCATTCTGAACGTG 540179
Score = 123 bits (136), Expect = 2e-22
Identities = 385/592 (65%), Gaps = 12/592 (2%)
Strand=Plus/Plus
Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGG 550047
|||| | || || || ||| | || ||||| ||| || ||||| |||| || ||||
Sbjct 538727 AGTATCCATTGGCATCGATCTGGGCACCACCTATTCCTGCGTTGGGGTTTTCCAGCATGG 538786
Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107
||||| || || || ||||| || || || ||||| || ||||| ||||| | ||
Sbjct 538787 CAAAGTGGAGATAATCGCCAACGACCAGGGCAACAGGACCACTCCCAGCTATGTGGCCTT 538846
Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167
||| || || || | | |||| || || || || | |||| | | || || ||
Sbjct 538847 CACAGACACAGAGCGGCTCATTGGAGACGCCGCCAAGAACCAAGTCGCCATGAACCCAAC 538906
Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227
||| || | ||||| || ||||| | || ||||||| || || || || ||| ||
Sbjct 538907 CAACACAGTCTTTGACGCCAAACGGCTCATCGGAAGAAACTTCAACGACCCGGTTGTCCA 538966
Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287
| | || ||||| | ||||||||| | | | | || |||||| || | | |
Sbjct 538967 GTCCGACATGAAACTCTGGCCTTTCAAGGTGATCAGTGACAATGGAAAGCCCAA-AGTCC 539025
Query 550288 AGCT--ACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTAT 550341
|| | ||| || | || | | ||| || | || || | |||| || ||
Sbjct 539026 AGGTGGACT-ATAAGGG----GGAGACCAAGGCGTTCTATCCTGAGGAGGTTTCCTCCAT 539080
Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401
||| | | || |||||| | | ||| || | | || || || || | ||
Sbjct 539081 GGTCCTGGTTAAGATGAAAGAGATAGCTGAGGCCTACCTGGGACAGAGGGTGTCGAACGC 539140
Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461
||| || || || || || || || ||||| |||||| | ||||| || || ||||| ||
Sbjct 539141 AGTCATCACAGTGCCGGCTTACTTCAATGATTCACAAAGACAAGCCACCAAGGATGCCGG 539200
Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521
|| ||||||| |||||||| | || |||||||| || || || || || ||||
Sbjct 539201 GGTGATCTCTGGACTAAATGTTCTGAGGATCATCAATGAGCCCACAGCAGCAGCCATTGC 539260
Query 550522 ATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573
||||| || |||||| ||| ||| | || || ||||||||||||
Sbjct 539261 CTATGGCCTGGATAAAGGTAAAAGAGGAGAGCGCAACGTGCTCATCTTTGAT 539312
>seq384
Length=497998
Score = 113 bits (124), Expect = 4e-19
Identities = 109/140 (78%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
||||||| || ||||| || || || || |||||||| || |||||||| || |||||||
Sbjct 331391 ATGCAGTCATCACTGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGATG 331332
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| || |||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct 331331 CTGGTGCCATCTCTGGGCTGAATGTGCTGCGCATCATCAATGAGCCTACTGCTGCAGCCA 331272
Query 550518 TTGCATATGGACTTGATAAA 550537
|||| ||||| || || |||
Sbjct 331271 TTGCTTATGGCCTGGACAAA 331252
>seq575
Length=385205
Score = 104 bits (114), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| ||| | || || || || || || |||||||| || || || || || |||||||
Sbjct 326259 ATGCTGTAGTGACCGTGCCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 326200
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || || |||| |||||||| |||||||| ||||| ||||| |||||||||||
Sbjct 326199 CAGGGACAATCTCTGGCCTTAATGTCCTTCGTATCATCAACGAACCCACTGCTGCTGCTA 326140
Query 550518 TTGCATATGGACTTGATAAA 550537
|||| ||||| || || |||
Sbjct 326139 TTGCTTATGGCCTGGACAAA 326120
>seq181
Length=707246
Score = 98.7 bits (108), Expect = 8e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 550395 CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAG 550454
|| |||| || || || ||||| || || || |||||||| ||||||||||| || ||||
Sbjct 106052 CGAATGCTGTTATCACGGTACCTGCCTACTTCAATGACTCTCAACGTCAAGCAACCAAAG 106111
Query 550455 ATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTG 550514
|||||||| ||| |||| || ||||| | | ||||| ||||| || ||||| || |
Sbjct 106112 ATGCTGGAACTATCTCTGGTCTAAATGTGTTGAGAATTATTAATGAGCCCACTGCAGCAG 106171
Query 550515 CACTTGCATATGGACTTGATAA 550536
| | || ||||| | |||||
Sbjct 106172 CTATCGCTTATGGCTTGGATAA 106193
Score = 87.8 bits (96), Expect = 1e-11
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| ||||| || ||||| || || || || || || || || || || || || |||||
Sbjct 90369 GCTGTAATCACAGTACCTGCCTACTTCAACGATTCCCAGCGCCAGGCCACAAAGGATGCC 90310
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| || |||| || |||||||| ||||| ||||||||||| || || |||||| ||
Sbjct 90309 GGTACCATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACCGCAGCTGCAATT 90250
Query 550520 GCATATGG 550527
|| |||||
Sbjct 90249 GCTTATGG 90242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028988317920820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |