Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq25 138 9e-27 seq384 113 4e-19 seq575 104 2e-16 seq181 98.7 8e-15 >seq25 Length=1388224 Score = 138 bits (152), Expect = 9e-27 Identities = 438/674 (65%), Gaps = 4/674 (1%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAA-ACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 || ||||| || ||||| || | || || | ||||| | || || ||| || || | Sbjct 539508 ACAGCTTGTGAGAGAGCAAAGAGGACCT-TGTCATCCAGCACACAGGCCAACATCGAGAT 539566 Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031 || || | |||||||||||||| | | | || | || | ||||| ||||| || Sbjct 539567 CGACTCTCTGTTTGAGGGAATTGACTTTTACACTTCAATCACAAGGGCACGGTTTGAGGA 539626 Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTC 552091 | ||| || ||||| || |||| | || ||||| || | | | |||| | Sbjct 539627 GCTCAATTCGGAGCTCTTCAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTGCAAGATGC 539686 Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151 || | || || ||||| || ||||||||||| || || ||||| || || |||||||| Sbjct 539687 CAAACTGGACAAGTCCAAGGTCCATGAAATTGTCCTGGTCGGTGGCTCCACCAGAATTCC 539746 Query 552152 TAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 ||||| | || | ||| || ||| ||||||||| | | | | || | || | | Sbjct 539747 CAAAATCCAGAAACTCTTACAGGACTT-TTTCAATGGCAGAGACCTGAACAAGAGCATCA 539805 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAA 552270 | |||||||| || || || || || || ||| | || || ||||| || || | | Sbjct 539806 ACCCAGATGAAGCCGTGGCTTACGGAGCAGCAGTCCAGGCTGCTATCCTCATGGGCGACA 539865 Query 552271 CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330 || || || | || || | | || | || || ||||||| ||||| || | | Sbjct 539866 CTTCAGAGAACGTCCAGGATCTGCTGCTGCTGGACGTGGCTCCTCTGTCTCTGGGCATCG 539925 Query 552331 AAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAA 552390 |||| | || || ||||||| | | ||| | |||| || || || || | || Sbjct 539926 AAACTGCAGGTGGAGTTATGACGCCTTTAATCAAGCGAAACACCACAATCCCCTCCAAGC 539985 Query 552391 AATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTG 552450 | | | | || || || || ||||| || || | | ||| || || | | | Sbjct 539986 AGACCCAGATTTTCTCCACCTACTCAGACAACCAGCCAGGTGTGCTGATCCAGGTGTACG 540045 Query 552451 AAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTA 552510 |||| || ||| | || ||||| || || | ||| || | ||| | | ||||| Sbjct 540046 AAGGTGAGAGAGCCATGACCAAAGACAACAACCTACTGGGCAAGTTTGAGCTCACAGGTA 540105 Query 552511 TTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATG 552570 | ||||||||||| | || || || || | || || || ||||| ||||| ||||||| Sbjct 540106 TCCCTCCTGCTCCCAGAGGTGTGCCACAGGTGGAGGTAACGTTCGACATCGACGCCAATG 540165 Query 552571 GAATTTTGAATGTG 552584 | ||| |||| ||| Sbjct 540166 GCATTCTGAACGTG 540179 Score = 123 bits (136), Expect = 2e-22 Identities = 385/592 (65%), Gaps = 12/592 (2%) Strand=Plus/Plus Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGG 550047 |||| | || || || ||| | || ||||| ||| || ||||| |||| || |||| Sbjct 538727 AGTATCCATTGGCATCGATCTGGGCACCACCTATTCCTGCGTTGGGGTTTTCCAGCATGG 538786 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 ||||| || || || ||||| || || || ||||| || ||||| ||||| | || Sbjct 538787 CAAAGTGGAGATAATCGCCAACGACCAGGGCAACAGGACCACTCCCAGCTATGTGGCCTT 538846 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 ||| || || || | | |||| || || || || | |||| | | || || || Sbjct 538847 CACAGACACAGAGCGGCTCATTGGAGACGCCGCCAAGAACCAAGTCGCCATGAACCCAAC 538906 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| || | ||||| || ||||| | || ||||||| || || || || ||| || Sbjct 538907 CAACACAGTCTTTGACGCCAAACGGCTCATCGGAAGAAACTTCAACGACCCGGTTGTCCA 538966 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 | | || ||||| | ||||||||| | | | | || |||||| || | | | Sbjct 538967 GTCCGACATGAAACTCTGGCCTTTCAAGGTGATCAGTGACAATGGAAAGCCCAA-AGTCC 539025 Query 550288 AGCT--ACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTAT 550341 || | ||| || | || | | ||| || | || || | |||| || || Sbjct 539026 AGGTGGACT-ATAAGGG----GGAGACCAAGGCGTTCTATCCTGAGGAGGTTTCCTCCAT 539080 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401 ||| | | || |||||| | | ||| || | | || || || || | || Sbjct 539081 GGTCCTGGTTAAGATGAAAGAGATAGCTGAGGCCTACCTGGGACAGAGGGTGTCGAACGC 539140 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| || || || || || || || ||||| |||||| | ||||| || || ||||| || Sbjct 539141 AGTCATCACAGTGCCGGCTTACTTCAATGATTCACAAAGACAAGCCACCAAGGATGCCGG 539200 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || ||||||| |||||||| | || |||||||| || || || || || |||| Sbjct 539201 GGTGATCTCTGGACTAAATGTTCTGAGGATCATCAATGAGCCCACAGCAGCAGCCATTGC 539260 Query 550522 ATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 ||||| || |||||| ||| ||| | || || |||||||||||| Sbjct 539261 CTATGGCCTGGATAAAGGTAAAAGAGGAGAGCGCAACGTGCTCATCTTTGAT 539312 >seq384 Length=497998 Score = 113 bits (124), Expect = 4e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || ||||| || || || || |||||||| || |||||||| || ||||||| Sbjct 331391 ATGCAGTCATCACTGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGATG 331332 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| || ||||| || || || |||||||| ||||||||||| || Sbjct 331331 CTGGTGCCATCTCTGGGCTGAATGTGCTGCGCATCATCAATGAGCCTACTGCTGCAGCCA 331272 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| || || ||| Sbjct 331271 TTGCTTATGGCCTGGACAAA 331252 >seq575 Length=385205 Score = 104 bits (114), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||| | || || || || || || |||||||| || || || || || ||||||| Sbjct 326259 ATGCTGTAGTGACCGTGCCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 326200 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || || |||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct 326199 CAGGGACAATCTCTGGCCTTAATGTCCTTCGTATCATCAACGAACCCACTGCTGCTGCTA 326140 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| || || ||| Sbjct 326139 TTGCTTATGGCCTGGACAAA 326120 >seq181 Length=707246 Score = 98.7 bits (108), Expect = 8e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 550395 CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAG 550454 || |||| || || || ||||| || || || |||||||| ||||||||||| || |||| Sbjct 106052 CGAATGCTGTTATCACGGTACCTGCCTACTTCAATGACTCTCAACGTCAAGCAACCAAAG 106111 Query 550455 ATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTG 550514 |||||||| ||| |||| || ||||| | | ||||| ||||| || ||||| || | Sbjct 106112 ATGCTGGAACTATCTCTGGTCTAAATGTGTTGAGAATTATTAATGAGCCCACTGCAGCAG 106171 Query 550515 CACTTGCATATGGACTTGATAA 550536 | | || ||||| | ||||| Sbjct 106172 CTATCGCTTATGGCTTGGATAA 106193 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || ||||| || ||||| || || || || || || || || || || || || ||||| Sbjct 90369 GCTGTAATCACAGTACCTGCCTACTTCAACGATTCCCAGCGCCAGGCCACAAAGGATGCC 90310 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || || |||| || |||||||| ||||| ||||||||||| || || |||||| || Sbjct 90309 GGTACCATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACCGCAGCTGCAATT 90250 Query 550520 GCATATGG 550527 || ||||| Sbjct 90249 GCTTATGG 90242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028988317920820