Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1721 104 2e-17 >seq1721 Length=144067 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | | |||| |||| ||| Sbjct 118130 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 118071 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| | ||| || || || ||||||||||| || || || ||||| Sbjct 118070 TTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTA 118011 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || || || |||| || ||||| || Sbjct 118010 GCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTG 117951 Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473 | ||||| ||||| ||||||||| || Sbjct 117950 AGGGTTTTCACAAAGATCTGCATGTTT 117924 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||||||||| || ||||| || | || || | | |||| |||| ||| Sbjct 118358 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGC 118299 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || || |||||||| || || ||||| || || Sbjct 118298 TTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTG 118239 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 118238 GCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTG 118179 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 118178 AGGGTCTTGACGAAGATCTGCAT 118156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396250301137026