Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq755 275 1e-68 seq35 102 2e-16 seq1980 87.8 3e-12 >seq755 Length=318311 Score = 275 bits (304), Expect = 1e-68 Identities = 566/837 (68%), Gaps = 20/837 (2%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||||| ||||||||| ||| || | ||| | |||| | | ||| ||| Sbjct 110117 CCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCA 110176 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485 |||| |||||||||||| ||||| ||||||| || |||||||| || Sbjct 110177 GCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAAC 110236 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545 || ||||| | ||| |||| || | || || |||||||| ||||| |||||| Sbjct 110237 GGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTG 110296 Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605 || | | |||||||| | ||||| ||||| || || |||||| |||||| | ||| Sbjct 110297 TGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTG 110356 Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665 || ||||| ||| ||||| || | | ||| || || || ||| Sbjct 110357 TTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTT-------TTTAAAGTCAAA 110409 Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 |||| || || | || ||| ||| ||||| | | |||||| ||||| Sbjct 110410 AGTCCGCTC-CGGGGTGACGT---ACAT----GTTGAGGGCGATGGAGGCCAGATTACAG 110461 Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785 || || |||||||| | | |||| || | | ||| ||||| |||||||||||||||||| Sbjct 110462 ACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTG 110521 Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845 ||||| ||||| | | || || ||| | ||| ||||| ||||| ||||| | Sbjct 110522 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAC 110581 Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCAC 221904 || || |||||| ||| | | | | || || ||| || | ||| || |||| Sbjct 110582 GGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCT-GCTGAGCCTTCAC 110640 Query 221905 CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTC 221964 | | |||| || | | | ||| ||||||| ||| |||||| ||||||| || Sbjct 110641 CACACGCTTG---GCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTC 110697 Query 221965 ACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTT 222024 || | ||||||||| || ||||| | ||||||||||||| ||||| || ||| Sbjct 110698 CCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTT 110757 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 | | ||||||| |||||| || || |||||||| || || | || || ||||||| Sbjct 110758 GCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGC 110817 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 || |||||||||| || |||| ||| |||| || | || || || | |||| ||| Sbjct 110818 CCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTG 110877 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 ||||||||||| || | ||| | || ||||||| ||||||||||||||| || || Sbjct 110878 CCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGAC 110934 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 |||||| || |||| || ||||||||| ||| | |||| || ||| ||| || | Sbjct 109825 CATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGAT 109884 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 || || || || || || ||||| | ||| | ||| ||| | | |||||| Sbjct 109885 CTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 109944 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||| ||||||||||| || ||| ||| |||||||| || |||| |||||| || Sbjct 109945 CTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCT 110004 Query 221245 GTT 221247 ||| Sbjct 110005 GTT 110007 >seq35 Length=1322159 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || || ||||| ||||||||||||||||| ||| ||||| ||||| Sbjct 415254 GGGGAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGTTCATTTGCT 415195 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||| ||||| ||| ||| || ||||| || ||| || ||||| ||||| Sbjct 415194 GCCATCTATTGGCTAAAGAAGAGAGGCCTGATGCCTGGTCTGACCTACTCCAATGAGCTG 415135 Query 25993 ATCAGCAGGGACGAGG 26008 ||||||||||| |||| Sbjct 415134 ATCAGCAGGGATGAGG 415119 >seq1980 Length=102293 Score = 87.8 bits (96), Expect = 3e-12 Identities = 109/147 (74%), Gaps = 12/147 (8%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGG--- 221475 ||||||||||| ||||||||||||||||||| |||||||| || |||||| || Sbjct 4940 CAGGGCAGCGTAGTAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCT 4999 Query 221476 --AGAAGTGAAGG-GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 ||| || || ||||| || || |||| | || ||||| ||||| || ||||| Sbjct 5000 TTCGAATGGATGGCGCATA---AGGAT---AAAGGCATCAGCCAGACCCTGCACACCGAT 5053 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGA 221559 || || |||||||| | |||||| || Sbjct 5054 TCCAATTGGCCTGTGACGCCTGTTAGA 5080 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182 || ||||| ||||| ||||||||||| | | ||| | ||| ||| | | || ||| Sbjct 4449 ACCTGGAATTCTCCTGAGAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAAGCCTCAATG 4508 Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242 ||| |||||||||||||||||||| ||| || |||||||| || |||| ||||| Sbjct 4509 GACTCATTGTTGCCCAGGATCTGAGCAGTGGAAGCTGTGGGCATCGGAGCCAAAAGCAGG 4568 Query 221243 CTGTT 221247 ||||| Sbjct 4569 CTGTT 4573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928777249761920