Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq755 275 1e-68
seq35 102 2e-16
seq1980 87.8 3e-12
>seq755
Length=318311
Score = 275 bits (304), Expect = 1e-68
Identities = 566/837 (68%), Gaps = 20/837 (2%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425
|| ||||||| ||||||||| ||| || | ||| | |||| | | ||| |||
Sbjct 110117 CCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCA 110176
Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485
|||| |||||||||||| ||||| ||||||| || |||||||| ||
Sbjct 110177 GCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAAC 110236
Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545
|| ||||| | ||| |||| || | || || |||||||| ||||| ||||||
Sbjct 110237 GGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTG 110296
Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605
|| | | |||||||| | ||||| ||||| || || |||||| |||||| | |||
Sbjct 110297 TGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTG 110356
Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665
|| ||||| ||| ||||| || | | ||| || || || |||
Sbjct 110357 TTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTT-------TTTAAAGTCAAA 110409
Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725
|||| || || | || ||| ||| ||||| | | |||||| |||||
Sbjct 110410 AGTCCGCTC-CGGGGTGACGT---ACAT----GTTGAGGGCGATGGAGGCCAGATTACAG 110461
Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785
|| || |||||||| | | |||| || | | ||| ||||| ||||||||||||||||||
Sbjct 110462 ACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTG 110521
Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845
||||| ||||| | | || || ||| | ||| ||||| ||||| ||||| |
Sbjct 110522 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAC 110581
Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCAC 221904
|| || |||||| ||| | | | | || || ||| || | ||| || ||||
Sbjct 110582 GGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCT-GCTGAGCCTTCAC 110640
Query 221905 CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTC 221964
| | |||| || | | | ||| ||||||| ||| |||||| ||||||| ||
Sbjct 110641 CACACGCTTG---GCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTC 110697
Query 221965 ACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTT 222024
|| | ||||||||| || ||||| | ||||||||||||| ||||| || |||
Sbjct 110698 CCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTT 110757
Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084
| | ||||||| |||||| || || |||||||| || || | || || |||||||
Sbjct 110758 GCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGC 110817
Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144
|| |||||||||| || |||| ||| |||| || | || || || | |||| |||
Sbjct 110818 CCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTG 110877
Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
||||||||||| || | ||| | || ||||||| ||||||||||||||| || ||
Sbjct 110878 CCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGAC 110934
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||||| || |||| || ||||||||| ||| | |||| || ||| ||| || |
Sbjct 109825 CATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGAT 109884
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
|| || || || || || ||||| | ||| | ||| ||| | | ||||||
Sbjct 109885 CTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 109944
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||| ||||||||||| || ||| ||| |||||||| || |||| |||||| ||
Sbjct 109945 CTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCT 110004
Query 221245 GTT 221247
|||
Sbjct 110005 GTT 110007
>seq35
Length=1322159
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| | || || ||||| ||||||||||||||||| ||| ||||| |||||
Sbjct 415254 GGGGAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGTTCATTTGCT 415195
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
||||||| ||||| ||| ||| || ||||| || ||| || ||||| |||||
Sbjct 415194 GCCATCTATTGGCTAAAGAAGAGAGGCCTGATGCCTGGTCTGACCTACTCCAATGAGCTG 415135
Query 25993 ATCAGCAGGGACGAGG 26008
||||||||||| ||||
Sbjct 415134 ATCAGCAGGGATGAGG 415119
>seq1980
Length=102293
Score = 87.8 bits (96), Expect = 3e-12
Identities = 109/147 (74%), Gaps = 12/147 (8%)
Strand=Plus/Plus
Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGG--- 221475
||||||||||| ||||||||||||||||||| |||||||| || |||||| ||
Sbjct 4940 CAGGGCAGCGTAGTAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCT 4999
Query 221476 --AGAAGTGAAGG-GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532
||| || || ||||| || || |||| | || ||||| ||||| || |||||
Sbjct 5000 TTCGAATGGATGGCGCATA---AGGAT---AAAGGCATCAGCCAGACCCTGCACACCGAT 5053
Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGA 221559
|| || |||||||| | |||||| ||
Sbjct 5054 TCCAATTGGCCTGTGACGCCTGTTAGA 5080
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182
|| ||||| ||||| ||||||||||| | | ||| | ||| ||| | | || |||
Sbjct 4449 ACCTGGAATTCTCCTGAGAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAAGCCTCAATG 4508
Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242
||| |||||||||||||||||||| ||| || |||||||| || |||| |||||
Sbjct 4509 GACTCATTGTTGCCCAGGATCTGAGCAGTGGAAGCTGTGGGCATCGGAGCCAAAAGCAGG 4568
Query 221243 CTGTT 221247
|||||
Sbjct 4569 CTGTT 4573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928777249761920
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