Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq25 147 1e-29
seq181 113 3e-19
seq384 111 1e-18
seq1721 100 2e-15
seq1692 93.3 3e-13
seq575 89.7 3e-12
>seq25
Length=1388224
Score = 147 bits (162), Expect = 1e-29
Identities = 406/615 (66%), Gaps = 8/615 (1%)
Strand=Plus/Plus
Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615
|| ||||| ||||| |||||||| | | | ||| || |||||||| ||||| ||
Sbjct 539568 GACTCTCTGTTTGAGGGAATTGACTTTTACACTTCAATCACAAGGGCACGGTTTGAGGAG 539627
Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCT 475675
| ||| || ||||| || |||| | || || ||||| | | || |||| |
Sbjct 539628 CTCAATTCGGAGCTCTTCAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTGCAAGATGCC 539687
Query 475676 AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCA 475735
||||| ||||| || | |||||||||||||| || || || || || || ||||||||
Sbjct 539688 AAACTGGACAAGTCCAAGGTCCATGAAATTGTCCTGGTCGGTGGCTCCACCAGAATTCCC 539747
Query 475736 AAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAA 475794
||||| ||||| ||| || | | ||| ||||| | | | | || | || | ||
Sbjct 539748 AAAAT-CCAGAAACTCTTACAGGACTTTTTCAATGGCAGAGACCTGAACAAGAGCATCAA 539806
Query 475795 TCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTAT-TTTATCAG-GTCA- 475851
|| |||||||| || || || ||||| || ||||| || ||||| | || | | ||
Sbjct 539807 CCCAGATGAAGCCGTGGCTTACGGAGCAGCAGTCCAGGCTGCTATCCTCATGGGCGACAC 539866
Query 475852 ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911
||| ||||| | | || | | || | ||||| |||| || || | || |
Sbjct 539867 TTCA---GAGAACGTCCAGGATCTGCTGCTGCTGGACGTGGCTCCTCTGTCTCTGGGCAT 539923
Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971
||||| | || || ||||||| | | || | |||| || | ||||| | |||
Sbjct 539924 CGAAACTGCAGGTGGAGTTATGACGCCTTTAATCAAGCGAAACACCACAATCCCCTCCAA 539983
Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031
| | | | || ||||| || || || || || || ||| ||||| | |
Sbjct 539984 GCAGACCCAGATTTTCTCCACCTACTCAGACAACCAGCCAGGTGTGCTGATCCAGGTGTA 540043
Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091
|||||||| ||| | || ||||| || ||| ||| || | ||| | || |||
Sbjct 540044 CGAAGGTGAGAGAGCCATGACCAAAGACAACAACCTACTGGGCAAGTTTGAGCTCACAGG 540103
Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151
||| ||||||||||||||||| || || || | || || || || || || || || ||
Sbjct 540104 TATCCCTCCTGCTCCCAGAGGTGTGCCACAGGTGGAGGTAACGTTCGACATCGACGCCAA 540163
Query 476152 TGGTATTCTTAATGT 476166
||| ||||| || ||
Sbjct 540164 TGGCATTCTGAACGT 540178
>seq181
Length=707246
Score = 113 bits (124), Expect = 3e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || || || || || || || || ||||| ||||||||||||||||| |||||||
Sbjct 106055 ATGCTGTTATCACGGTACCTGCCTACTTCAATGACTCTCAACGTCAAGCAACCAAAGATG 106114
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| |||| || | ||||| ||||| || | ||||||||||| || || ||||| ||
Sbjct 106115 CTGGAACTATCTCTGGTCTAAATGTGTTGAGAATTATTAATGAGCCCACTGCAGCAGCTA 106174
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
| |||||||| | ||||||||
Sbjct 106175 TCGCTTATGGCTTGGATAAGAA 106196
Score = 91.5 bits (100), Expect = 1e-12
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| ||||| || || || || || || || ||||| || || || || || || |||||
Sbjct 90369 GCTGTAATCACAGTACCTGCCTACTTCAACGATTCCCAGCGCCAGGCCACAAAGGATGCC 90310
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| | || | || || |||||| | ||||| || ||||||||||| ||||| ||| ||
Sbjct 90309 GGTACCATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACCGCAGCTGCAATT 90250
Query 474857 GCTTATGGTCTTGATAAGAA 474876
|||||||| | || |||||
Sbjct 90249 GCTTATGGGTTGGACAAGAA 90230
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110
|| || || || ||| || |||| ||| | || ||| || ||||||||||| |
Sbjct 108310 ACAAAGGACAACAACTTGCTGGGAAAGTTTGAGCTGACAGGCATCCCTCCTGCTCCACGT 108369
Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170
|| ||||| || |||||||| || ||||| |||||||| |||||||| || ||||| ||
Sbjct 108370 GGCGTTCCCCAGATTGAAGTGACATTTGACATTGATGCCAATGGTATCCTCAATGTCTCT 108429
Query 476171 GCTTGTGATAA 476181
||| ||||||
Sbjct 108430 GCTGTTGATAA 108440
>seq384
Length=497998
Score = 111 bits (122), Expect = 1e-18
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091
||||||||| || | ||||| |||||||| | || || | ||| | || ||
Sbjct 330195 TGAAGGTGAGAGGGCCATGACTAAGGATAATAATATCCTGGGGAAGTTTGAACTCACTGG 330136
Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151
|||||| ||||||||||||||||||||||| ||||| || || |||||||||||||| ||
Sbjct 330135 TATTCCACCTGCTCCCAGAGGAGTTCCTCAGATTGAGGTGACCTTTGATATTGATGCCAA 330076
Query 476152 TGGTATTCTTAATGTTACTGC 476172
||| ||||| || || ||||
Sbjct 330075 TGGCATTCTCAACGTGTCTGC 330055
>seq1721
Length=144067
Score = 100 bits (110), Expect = 2e-15
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
||||| || ||||| || || || |||||| | || || |||| || || | |
Sbjct 118373 AGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGG 118314
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
||| || || ||||| |||||||| ||||| | || || ||||| ||||| || |||
Sbjct 118313 CCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCC 118254
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734
|||||||| ||||| |||||| ||||| || ||| || | ||||||||
Sbjct 118253 TTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTG 118194
Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || ||||| ||||| ||||| || ||
Sbjct 118193 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 118159
>seq1692
Length=147762
Score = 93.3 bits (102), Expect = 3e-13
Identities = 116/156 (74%), Gaps = 5/156 (3%)
Strand=Plus/Minus
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC- 474447
|| || || |||||||||||||| ||||| | | || || |||||||| | || ||
Sbjct 47659 GTGGAGATCATTGCCAATGACCAGGGTAACCGCATCACCCCCTCATATGTGGCCTTCACC 47600
Query 474448 --TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CATCTAATCCTGT 474504
||| ||| | ||| ||||| |||||||| || ||| ||||| | ||||| ||||
Sbjct 47599 AGTGAGGGTGAGCGTCTGATTGGTGATGCTGCCAAGAATC-AGCTGACCTCTAACCCTGA 47541
Query 474505 TAATACTATTTTTGATGCTAAAAGATTGATTGGTCG 474540
|| ||| | |||||||| || ||| ||||||||||
Sbjct 47540 GAACACTGTCTTTGATGCCAAGAGACTGATTGGTCG 47505
>seq575
Length=385205
Score = 89.7 bits (98), Expect = 3e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||| |||| ||||| | || ||||| ||| || || || || | ||| |||| |||
Sbjct 327043 GCAGTTGGCATTGACCTGGGCACTACCTACTCCTGCGTGGCAGTGTTTCAACATGGCAAA 326984
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || || |||||||||||||| || || || || || || |||||| | ||||||
Sbjct 326983 GTTGAGATCATTGCCAATGACCAGGGAAACAGGACCACGCCCAGTTATGTTGCCTTTACT 326924
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC 474492
|| ||||| || ||||| ||||| || || | |||| |||
Sbjct 326923 GACACTGAGAGGCTGATTGGGGATGCAGCCAAGAACCAAGTTGC 326880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267929637751064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |