Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq82 156 5e-33
>seq82
Length=938037
Score = 156 bits (172), Expect = 5e-33
Identities = 535/825 (65%), Gaps = 23/825 (3%)
Strand=Plus/Plus
Query 160134 AGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTG 160193
|||| ||||| | ||| || || ||||||| |||| | | |||| | ||| |
Sbjct 66664 AGGACCCAGTTGATGTCCCCAACTCCATACACGCACACGGCTCTTCTGTGAATACCGGTA 66723
Query 160194 CAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAAC 160253
|| || ||| | |||||||| || || ||||| | || |||||| || |
Sbjct 66724 CACGGGTAGTAGGGGGCTCCTTTTTGCATATCTCCTTCTAAATAGCTCCACTTGACCACG 66783
Query 160254 CTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGA 160313
| ||| | ||||||||||| ||| |||| || |||| | || || | ||||||
Sbjct 66784 CGGGCGAGGGCCTGCATGTCTGAGATGTCATACTTGTCGCTGGCAGGCACAGATCCGGGA 66843
Query 160314 ACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTA 160373
|| || || | ||| | ||||||||||||||| || || |||||||||||||||||
Sbjct 66844 ACTGAAGGAATCCTCTGCAAGGTGGCCCACAGGTGCTCATCAGGGCTGTACGTGTCCTTC 66903
Query 160374 GACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTG 160433
||| |||| |||| | || | |||| || ||||| | || ||| |||
Sbjct 66904 TCCCACTCCAGAAACTTTTGAATCTCTCCGTCCTCCATCACGTGCTTCACAAAGGCTCTT 66963
Query 160434 GTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTG 160493
|| || |||||||| || | || ||||| || || || || ||||| | ||||
Sbjct 66964 GTGACCACAAAGTAGGCATTTCCAGAGAACATGGGGCTGCTGATGGGCGGGGGAGGTTTG 67023
Query 160494 TCCTGACCGGTGTT--AGACACCACTCCTTTCACCAGCG-CGTGTCGCTTCTTCCACCTG 160550
| | ||||| || ||| ||| || || | || ||| | |
Sbjct 67024 TGCACGTATGTGTTTGTGAGGCCA------TCAGTGACGTTGTAATGAAACTGCCAGCGG 67077
Query 160551 ACCATCTTGT--GCGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATT 160608
|||||| | ||| || ||| |||| | ||||| || | ||| | |
Sbjct 67078 GTTTTCTTGTACTCACTGG--TGACTTCACTCTCCATGCTGTTCTTTCCATTGAGGGCCT 67135
Query 160609 TCAGCTGC-TTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTT 160667
|||| ||| || || |||||| || || |||| || ||||| || ||||| |||
Sbjct 67136 TCAG-TGCTTTTACCATCTCTCCATTTGTTTTGATGGGGAAGTCTGTCCCGCAGGTGTTC 67194
Query 160668 ATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCC 160727
| || |||| |||| || | || |||| ||| ||||||| || | |||||||
Sbjct 67195 AGCAGGTACCTCCAGTTGACTGGAGAGTGCAGCAGATCCTTCATGCAGTTCAGATCTGCC 67254
Query 160728 TGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTA 160787
||||| | | ||| || |||||||| || |||| || ||||| ||||| || |||
Sbjct 67255 TGCACTCTGGACCACGAGGCGTACACCACCCGTTCTAACTTGCTGGCTACAAACACATTA 67314
Query 160788 TCGAAACACGACACGATTCCCACCACCGC---CAGAAAGAACATCT-TATCCGCCTTTCG 160843
|| || || | || || |||| || | |||| ||| | | ||| |
Sbjct 67315 GGAAAGCATGAAGCAATGGCCGCCACAGCTTTCTGAAA----CTCTGCAGAGGACTTCTG 67370
Query 160844 GTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAA 160903
|||||| || ||||| || | |||||| |||||||| | || | || | | ||| ||
Sbjct 67371 GTCCACATGTACGCAGTAGACGTTCTGGGGCGCGTACACAGCTCGCAGAAGTCGCTCAAA 67430
Query 160904 CATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948
|||||| ||||| | ||||||||| || ||||| || || |||||
Sbjct 67431 CATCTCAATCTTCTCATGGATCACCATTGAGTACGCAATGGGAAA 67475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577177221733680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |