Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq755 161 9e-35 seq210 118 1e-21 seq1721 104 2e-17 >seq755 Length=318311 Score = 161 bits (178), Expect = 9e-35 Identities = 956/1519 (63%), Gaps = 35/1519 (2%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | || |||||| || |||| || || | || ||| |||||| ||||| | | Sbjct 109876 GTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGC 109935 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| | || |||||||| ||||| ||||| || |||| || || ||||| |||| Sbjct 109936 CTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAG 109995 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || || |||| | |||| ||| ||||| ||| | ||||||||| Sbjct 109996 CAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA 110055 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || ||| | || | || | |||||| |||||||| | || ||| || | || Sbjct 110056 CAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGA 110115 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 ||| ||||||| ||||| || ||||| |||| |||| ||||||||| || || Sbjct 110116 GCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGC 110175 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 | | ||||| || || ||| || || ||||||| | ||||||| ||| || | Sbjct 110176 AGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAA 110235 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 ||| || | | |||| ||||| || | |||||||| || | ||||| || | Sbjct 110236 CGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCT 110295 Query 138921 ATGGCGCAGATTTGACGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 |||||| || || || | ||||| | || || ||||| | ||||| || Sbjct 110296 GTGGCGCTTGTTGGA---ATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAAT 110352 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | ||| |||| || || || || | | | || ||| || | || Sbjct 110353 CTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAAGT 110412 Query 139038 GC-CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGC 139096 | | ||| || ||||| ||| |||||| || ||||| | || | Sbjct 110413 CCGCTCCGGGGT-------GACGT--ACA----TGTTGAGGGCGATGGAGGCCAGATTAC 110459 Query 139097 ACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACT 139156 | ||||| || ||||| || | |||||||||| ||||| | || | || || |||| Sbjct 110460 AGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACT 110519 Query 139157 TGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATAT 139216 |||| || || | ||| || || ||||| || | ||| || || |||||||| ||||| | Sbjct 110520 TGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGT 110579 Query 139217 ACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTA 139276 |||| || || || ||| || | ||| || ||| | ||| | | ||| | | Sbjct 110580 ACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCA 110639 Query 139277 TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCA 139335 |||| | | || ||| ||| | |||||| || || || || | | Sbjct 110640 CCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCC 110699 Query 139336 CC--GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393 || | | |||| || | |||| || |||||||| || ||||| | || Sbjct 110700 CCCAGCACTCGTC---CAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGT 110756 Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCG 139453 | || || | | ||||||||||||| || ||||| | ||| | | | || | | Sbjct 110757 TGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGG 110816 Query 139454 CCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGT 139513 || ||| || ||| || |||| |||| | ||||| || || |||||| || Sbjct 110817 CCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGT 110876 Query 139514 GCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGT 139570 |||| || |||| || ||||| | || || | || |||||||| || ||||||| Sbjct 110877 GCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGT 110936 Query 139571 GTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGG 139630 || | | || ||| | || | || ||| || | || ||| | | | || |||| Sbjct 110937 AACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGG 110996 Query 139631 TGCTACGGATG-GGACTGTTGCGAGCTCGGACGTCATGT-ACATTGATGCCGATTCCGCC 139688 | | | |||| | | || | | || || | || | || | ||||| || || Sbjct 110997 TACCAGAGATGTAGCTTCCTGTG-GATCTGATG-CAGCTGACCGCCACACCGATGCCTCC 111054 Query 139689 GCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGT 139747 | | ||||| || | | || | || | | || || || || ||| ||||||| Sbjct 111055 AGCCGACTTGGAGATGAGGGCACACT-GCTTCAGAGTGTCATAGATGCCTTCGATGCTGT 111113 Query 139748 CGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAA 139807 |||| | ||| | || ||| ||||| || || || || || || || || | Sbjct 111114 CGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGA 111173 Query 139808 ACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGG 139867 | ||||| || ||||| |||||| | | ||||| || | ||| || ||||||| Sbjct 111174 AGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGG 111233 Query 139868 CGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCC 139927 | | || ||| || |||||| || || || || | ||| ||||| || || | Sbjct 111234 CTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATGTGCTGCGGAC 111293 Query 139928 GTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAA 139987 | |||||||| ||| | ||| || |||||| | ||| || |||||| |||| | Sbjct 111294 GCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGA 111353 Query 139988 AGTACCTATAGTTGAAATC 140006 || | | ||| |||||| Sbjct 111354 AGAAGTTGTAGGAGAAATC 111372 >seq210 Length=679747 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || ||| | Sbjct 555761 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACACTGGAGGTGGAGCCCAGC 555820 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| ||||| |||||||| || || ||||| || || Sbjct 555821 GACACTATCGAGAACGTCAAAGCTAAA-ATCCAGGACAAAGAGGGGATCCCTCCTGACCA 555879 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||||| || |||||||| ||| | | | || || || || Sbjct 555880 GCAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGCACTCTCTCTGACTACAA 555939 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || || || || || || ||| ||||| |||| || | |||||| Sbjct 555940 CATCCAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCTGAGGGGAGGC 555988 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 555532 GATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 555591 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| |||| | || ||| ||||||||| |||||||| || || ||||| || || Sbjct 555592 CGACACCATAGAGAATGTGAAAGCAAAGATCCAGGACAAAGAGGGGATCCCTCCTGACCA 555651 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||| ||||| || || |||||||| ||| | | | | || || || || Sbjct 555652 GCAGAGGCTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTACAA 555711 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| || || || || || || || |||| Sbjct 555712 CATCCAGAAAGAGTCCACCCTCCATCTTG 555740 >seq1721 Length=144067 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| | Sbjct 118384 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAGCCCAGC 118443 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| |||||||| || || || || Sbjct 118444 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 118503 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || |||||||||||| | | | | || || || ||| Sbjct 118504 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118563 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 118564 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCG 118598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || ||||| || || ||| Sbjct 117928 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 117987 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| ||||| ||||| || || || || || Sbjct 117988 GACACCATCGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 118047 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || |||||||| ||| | | | | || || || ||| Sbjct 118048 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 118107 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 118108 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 118142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| Sbjct 118156 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 118215 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || || || Sbjct 118216 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAG 118275 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||||||| | | | | || || || ||| Sbjct 118276 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118335 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || ||||| ||||| || || ||| | ||| |||| Sbjct 118336 ATCCAAAAAGAATCCACCCTCCACCTTGTGCTGCG 118370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449864881197040