Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq181 215 8e-50 seq1344 206 4e-47 seq1081 206 4e-47 seq296 183 5e-40 seq755 114 2e-19 seq1579 87.8 3e-11 seq1745 86.0 1e-10 >seq181 Length=707246 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| |||||||| || ||||||||| ||||||| || ||| ||| Sbjct 112407 TGTACTTGGTGACGGCCTTTGTACCCTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 112348 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||||||||||||||| | || ||| ||| | |||||| | Sbjct 112347 GCAGCAGGCGCACGGCGGTCTGGATCTCCCTGGACGTGATGGTGGATCTCTTGTTGTAGT 112288 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| || || | ||||||| || | ||||||||||||||||| |||| Sbjct 112287 GCGCCAGGCGGGACGCTTCCCCGGCGATGCGCTCAAAGATGTCGTTGACAAACGAATTCA 112228 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 ||||| ||| | |||| |||||| ||| ||| |||||||||||||| |||||||||| Sbjct 112227 TGATCCCCATGGCTTTGGAGGAGATCCCCGTGTCCGGGTGCACCTGCTTCAGCACCTTGT 112168 Query 1485710 AAAC 1485713 | || Sbjct 112167 ACAC 112164 >seq1344 Length=280262 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 18156 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 18215 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||||||||||||||||| | || ||| ||| ||||||||| | Sbjct 18216 GCAGCAGCCTGACGGCGGTCTGGATCTCCCTGGACGTGATGGTGGAGCGCTTGTTGTAGT 18275 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||||| |||| |||||| |||| |||||||||| Sbjct 18276 GGGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGCTGACGAACGAGTTCA 18335 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||||||||||||| |||||||||| Sbjct 18336 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 18395 Query 1485710 AAAC 1485713 | || Sbjct 18396 ACAC 18399 >seq1081 Length=288474 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 275112 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 275053 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||||||||||||||||| | || ||| ||| ||||||||| | Sbjct 275052 GCAGCAGCCTGACGGCGGTCTGGATCTCCCTGGACGTGATGGTGGAGCGCTTGTTGTAGT 274993 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||||| |||| |||||| |||| |||||||||| Sbjct 274992 GGGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGCTGACGAACGAGTTCA 274933 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||||||||||||| |||||||||| Sbjct 274932 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 274873 Query 1485710 AAAC 1485713 | || Sbjct 274872 ACAC 274869 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 280030 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCTCCGGGCA 279971 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||||||||||||||||| | || ||| ||| ||||||||| | Sbjct 279970 GCAGCAGCCTGACGGCGGTCTGGATCTCCCTGGACGTGATGGTGGAGCGCTTGTTGTAGT 279911 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||||| |||| |||||| |||| |||||||||| Sbjct 279910 GGGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGCTGACGAACGAGTTCA 279851 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||||||||||||| |||||||||| Sbjct 279850 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 279791 Query 1485710 AAAC 1485713 | || Sbjct 279790 ACAC 279787 >seq296 Length=553401 Score = 183 bits (202), Expect = 5e-40 Identities = 179/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 248224 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 248165 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||| | ||| ||| || ||| ||| ||||||||| || | Sbjct 248164 GCAGCAGCCGCACCGCCGTCTGCACCTCCCGGCTGGTGATGGTGGAGCGCTTGTT-GTAC 248106 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 ||||||| ||| ||||||||| ||||||| |||| || ||||||||| || |||||| Sbjct 248105 TGCGCCAGCCGGGACGCCTCGGTGGCGATGCGCTCGAACAGGTCGTTGACGAAGGAGTTC 248046 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696 ||||| ||| | | || |||||||||| ||| || || |||||| Sbjct 248045 ATGATGCTCATGGCTCTGCTGGAGATGCCGGTGTCCGGATGAACCTGC 247998 >seq755 Length=318311 Score = 114 bits (126), Expect = 2e-19 Identities = 272/417 (65%), Gaps = 0/417 (0%) Strand=Plus/Plus Query 2071578 GACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGT 2071637 ||||| || ||||| |||||| || | |||||||||| |||||||||||||| | Sbjct 110491 GACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTT 110550 Query 2071638 CAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGAC 2071697 | |||| |||||| |||| ||||||||| |||| ||||||||| |||||| | || Sbjct 110551 CCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGAT 110610 Query 2071698 GATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNN 2071757 |||||| |||| | || | || |||| | | || | || | Sbjct 110611 GATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATA 110670 Query 2071758 NNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGA 2071817 |||| | ||||| | | || |||||||| ||| || || || Sbjct 110671 CCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTT 110730 Query 2071818 CGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 || || | || |||||||| | || |||| | ||| ||||| ||| | Sbjct 110731 GGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGAT 110790 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||| ||| |||| || || || | |||| | ||||||||| || |||||| ||||| Sbjct 110791 CCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAG 110850 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 ||||| |||||| | ||| |||||||||||||| ||| ||| ||||| || Sbjct 110851 CTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCC 110907 Score = 114 bits (126), Expect = 2e-19 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || |||||||||| ||| | || | |||||||| || || |||||||| Sbjct 110926 CTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGA 110985 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGC----GCACCTTGTGCGCGGCAA 2073655 | ||| ||||| || | | |||| || | || | ||| || | || || Sbjct 110986 GTTGCCATTGGTACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCT---GACCGCCAC 111042 Query 2073656 AGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGC 2073715 | |||||||| || |||| |||||||||||| || |||| ||||| || || ||||||| Sbjct 111043 A-CCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGC 111101 Query 2073716 CCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752 | ||||| |||| | |||||| | | ||| ||||| Sbjct 111102 CTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCA 111138 Score = 96.9 bits (106), Expect = 5e-14 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 2069564 TCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 2069623 ||||||| || | | | ||| | | || ||||||| ||||||| | ||| |||| Sbjct 109836 TCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGC 109895 Query 2069624 CCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGC 2069683 | || || || | ||| |||||||||||||| ||| | ||||| | |||| |||| | Sbjct 109896 CGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTAC 109955 Query 2069684 CCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGC 2069743 |||||||||| | || | ||| |||||||| | |||| ||||| ||| | || || Sbjct 109956 CCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGC 110015 Query 2069744 CGT 2069746 ||| Sbjct 110016 CGT 110018 >seq1579 Length=169011 Score = 87.8 bits (96), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| || ||||| || |||||||||||||| |||||||||| ||| || ||| Sbjct 145 ACCTCCTCTGCCGTCCAGAACGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 204 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || |||||||||| | || |||||| || || || ||||||||||| Sbjct 205 TACTGGATGGGGAAGATGACGAAGCGACGAGGATTATCCTTCAGCAGCGGCTC 257 >seq1745 Length=198827 Score = 86.0 bits (94), Expect = 1e-10 Identities = 77/96 (80%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 1485620 GGTCGATC--ATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCC 1485677 ||||| || |||||| |||| |||||||||||||| ||| | ||| |||||||| Sbjct 152560 GGTCGGTCTNATGTCGCTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCC 152619 Query 1485678 CACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 |||||||||||||||||| ||||||||||| || Sbjct 152620 GGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACAC 152655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915627512804102