Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq210 159 2e-34
seq1721 158 8e-34
>seq210
Length=679747
Score = 159 bits (176), Expect = 2e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||||| | ||| |||||||| | |||| ||| ||||| ||||| ||||| ||
Sbjct 555987 CCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555928
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| ||||| |||||||| | |||||||| | ||
Sbjct 555927 AGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 555868
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||| ||||| | ||||| ||||||| | || | || ||| ||| ||
Sbjct 555867 ATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACC 555808
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || |||||||| || ||||||||||| |||||||||||||||
Sbjct 555807 TCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 555760
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| | | |||||| || || | |||| ||| ||||| ||||| ||||| ||
Sbjct 555759 CCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 555700
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || || ||||| | |||||||| | ||
Sbjct 555699 AGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGG 555640
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||| ||||| | || ||| ||| || |||| | || ||| ||| ||
Sbjct 555639 ATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACC 555580
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || | |||||| ||||||||||||||
Sbjct 555579 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533
Score = 96.9 bits (106), Expect = 2e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|||||||| | | | |||||||||||| | |||| ||| ||||| ||||| |||||
Sbjct 556441 TTTCCTCCACGGAGACGCAGGACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 556382
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
|| ||| |||| |||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct 556381 GAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTC 556326
>seq1721
Length=144067
Score = 158 bits (174), Expect = 8e-34
Identities = 174/230 (76%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || |||||||||| | |||||||| | ||
Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | ||||| ||||| || || || | ||| ||| |||||
Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGA 117977
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || | ||| |||||||| || |||||||| || |||||||||||||||
Sbjct 117976 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 117927
Score = 143 bits (158), Expect = 2e-29
Identities = 178/242 (74%), Gaps = 9/242 (4%)
Strand=Plus/Minus
Query 34743 AATCATTT-----CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAAT 34797
|||||||| || ||||||| | |||||| ||||| | ||| ||||||||| ||
Sbjct 118623 AATCATTTATTGACCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGAT 118564
Query 34798 GTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTG 34857
||| ||||| || ||| |||| |||| ||||| ||||| || |||||||||| | ||
Sbjct 118563 GTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTG 118504
Query 34858 CTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGAT 34915
|||||| | || | || |||||||| | || || ||||| || || || |
Sbjct 118503 CTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTG 118446
Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975
|| ||| ||| || || | ||| ||||||||||| ||||||||||| || |||||||||
Sbjct 118445 TCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGC 118386
Query 34976 AT 34977
||
Sbjct 118385 AT 118384
Score = 138 bits (152), Expect = 7e-28
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || ||||| | |||| || || || ||||| ||||| ||
Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || ||||| || | |||||||| | ||
Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| ||||||||||| | || || ||||| || || || | ||| ||| |||||
Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGA 118205
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| ||| |||||||| || ||||||||||| || |||||||||||
Sbjct 118204 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325669706141342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |