Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq25 159 3e-33
seq181 113 3e-19
seq575 98.7 7e-15
seq384 91.5 1e-12
>seq25
Length=1388224
Score = 159 bits (176), Expect = 3e-33
Identities = 928/1471 (63%), Gaps = 20/1471 (1%)
Strand=Plus/Minus
Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475
||| || |||| | ||| || ||||| |||||||| || | || || || || || |
Sbjct 540194 TTTGTCGACGGCGGACACGTTCAGAATGCCATTGGCGTCGATGTCGAACGTTACCTCCAC 540135
Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535
|| || || ||||| ||||||| ||||| ||| | | ||| | ||||| ||
Sbjct 540134 CTGTGGCACACCTCTGGGAGCAGGAGGGATACCTGTGAGCTCAAACTTGCCCAGTAGGTT 540075
Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595
|| ||||| || | || ||||| ||| | | ||||| || | | || ||
Sbjct 540074 GTTGTCTTTGGTCATGGCTCTCTCACCTTCGTACACCTGGATCAGCACACCTGGCTGGTT 540015
Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654
||||| || || | || | ||||| | | || | || ||||| ||||||| | |
Sbjct 540014 GTCTGAGTAGGTGGAGAAAA-TCTGGGTCTGCTTGGAGGGGATTGTGGTGTTTCGCTTGA 539956
Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714
| | | ||||||| ||||| || ||||| | || ||||| ||||||| || || |
Sbjct 539955 TTAAAGGCGTCATAACTCCACCTGCAGTTTCGATGCCCAGAGACAGAGGAGCCACGTCCA 539896
Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774
|| | | || || | || || ||| | || | || ||||| || || | |
Sbjct 539895 GCAGCAGCAGATCCTGGACGTTCTCTGAAGTGTCGCCCATGAGGATAGCAGCCTGGACTG 539836
Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834
| || || || || || |||||||| || || | | | || || | | | |||||||
Sbjct 539835 CTGCTCCGTAAGCCACGGCTTCATCTGGGTTGATGCTCTTGTTCAGGTCTCTGCCATTGA 539776
Query 281835 AAAAATT-TGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892
|||| | || |||| ||| ||| | || ||||| | | || || || || | ||
Sbjct 539775 AAAAGTCCTGTAAGA-GTT-TCTGGATTTTGGGAATTCTGGTGGAGCCACCGACCAGGAC 539718
Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952
||||||||| |||| || || |||||||| | ||| | | || ||||| || ||
Sbjct 539717 AATTTCATGGACCTTGGACTTGTCCAGTTTGGCATCTTGCAGGGCCTTCTCAACTGGCTC 539658
Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 282012
|| | || || | || ||| || || || || || || || || |||
Sbjct 539657 CAGTGTTCCCCTGAAGAGCTCCGAATTGAGCTCCTCAAACCGTGCCCTTGT--GATTGAA 539600
Query 282013 AT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070
| || || |||||||| || |||| ||| || | || || | | || || ||
Sbjct 539599 GTGTAAAAGTCAATTCCCTCAAACAGAGAGTCGATCTCGATGTTGGCCTGTGTGCTGGAT 539540
Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT 282130
|| | | | || || | ||||| ||||| | ||||| | | ||| | || ||
Sbjct 539539 GACAAGGTCCTCTTTGCTCTCTCACAAGCTGTGCGCAGTCTCCTCACCGCTCT--CTTAT 539482
Query 282131 --TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGAC 282188
|| | | || | || | |||||| || || || || || | | || | |
Sbjct 539481 TATGGCTGATGTCCTTCTTGTGTTTTCTTTTAAATTCCTCTACGAAGTGGTTGACCATGC 539422
Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248
| || ||||| || || || || | | || | ||||| || ||| | || | || |
Sbjct 539421 GGTTGTCAAAGTCCTCCCCACCAAGGTGTGTGTCTCCTGCGGTGGCTTTCACCTCAAAGA 539362
Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308
|| || || | | || | | || ||| ||| || ||||| | |||||| || |
Sbjct 539361 TGCCGTCCTCGATGGTCAGGATGGACACGTCAAAGGTGCCGCCACCGAGATCAAAGATGA 539302
Query 282309 GTACATTCATTTCTTTGTCTTGGTT---TTTATCAAGACCATACGCAAAAGCAGCAGCAG 282365
| || || || | |||| || |||||| || ||||| |||| || || || |
Sbjct 539301 GCACGTTGCGCTC-TCCTCTT--TTACCTTTATCCAGGCCATAGGCAATGGCTGCTGCTG 539245
Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425
| || ||||| || || |||| |||||| || |||| || || ||||| || ||||
Sbjct 539244 TGGGCTCATTGATGATCCTCAGAACATTTAGTCCAGAGATCACCCCGGCATCCTTGGTGG 539185
Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485
|||||||||||||||| || || || || || || || || || || | | || |
Sbjct 539184 CTTGTCTTTGTGAATCATTGAAGTAAGCCGGCACTGTGATGACTGCGTTCGACACCCTCT 539125
Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545
||| | || || ||| | | |||||| ||| | | ||| || |||| | |
Sbjct 539124 GTCCCAGGTAGGCCTCAGCTATCTCTTTCATCTTAACCAGGACCATGGAGGAAACCTCCT 539065
Query 282546 CTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 282605
| ||| | | ||||| || | ||| || | | | || || |
Sbjct 539064 CAGGATAGAACGCCTTGGTCTCCCCCTTATAGTCCACCTGGACTTTGGGCTTTCCATTGT 539005
Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665
|| | || || || || ||||| |||||| || || || ||| |||| || || |
Sbjct 539004 CACTGATCACCTTGAAAGGCCAGAGTTTCATGTCGGACTGGACAACCGGGTCGTTGAAGT 538945
Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGAT 282725
||| || || | ||||| || ||||| | || |||||||| || | || |||| |
Sbjct 538944 TTCTTCCGATGAGCCGTTTGGCGTCAAAGACTGTGTTGGTTGGGTTCATGGCGACTTGGT 538885
Query 282726 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 282785
||||| || |||||||| || | ||||| ||||| || | ||||| ||||| |
Sbjct 538884 TCTTGGCGGCGTCTCCAATGAGCCGCTCTGTGTCTGTGAAGGCCACATAGCTGGGAGTGG 538825
Query 282786 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845
| | || || || || || || || || || ||||| |||| || | || || || |
Sbjct 538824 TCCTGTTGCCCTGGTCGTTGGCGATTATCTCCACTTTGCCATGCTGGAAAACCCCAACGC 538765
Query 282846 AACTAAAAGTTGTTCCTAAATCAATACCAAT 282876
| | | || || || | ||| || |||||
Sbjct 538764 AGGAATAGGTGGTGCCCAGATCGATGCCAAT 538734
>seq181
Length=707246
Score = 113 bits (124), Expect = 3e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| ||||| | ||||| || | ||| || ||||| || ||||||||||||||||| |||
Sbjct 106196 TTCTTATCCAAGCCATAAGCGATAGCTGCTGCAGTGGGCTCATTAATAATTCTCAACACA 106137
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| ||||||| || |||| |||||||| || ||||| | ||| || || || || ||
Sbjct 106136 TTTAGACCAGAGATAGTTCCAGCATCTTTGGTTGCTTGACGTTGAGAGTCATTGAAGTAG 106077
Query 282452 GCAGGAACAGTAATAACGGCAT 282473
||||| || || ||||| ||||
Sbjct 106076 GCAGGTACCGTGATAACAGCAT 106055
>seq575
Length=385205
Score = 98.7 bits (108), Expect = 7e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| |||||||||||| ||||| || || || | | |||
Sbjct 326118 TTTTTGTCCAGGCCATAAGCAATAGCAGCAGCAGTGGGTTCGTTGATGATACGAAGGACA 326177
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
||||| |||| ||| | ||||||||||| ||||| || | || || || || || ||
Sbjct 326178 TTAAGGCCAGAGATTGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTAG 326237
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480
||||| || || | || |||| ||| ||
Sbjct 326238 GCAGGCACGGTCACTACAGCATTTGTGAC 326266
>seq384
Length=497998
Score = 91.5 bits (100), Expect = 1e-12
Identities = 109/147 (74%), Gaps = 1/147 (1%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| || |||||||| || ||||| || || | || |||
Sbjct 331250 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTAGGCTCATTGATGATGCGCAGCACA 331309
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| || || |||||||| |||||||| | || || || || || ||
Sbjct 331310 TTCAGCCCAGAGATGGCACCAGCATCTTTGGTGGCTTGACGCTGGGAGTCATTGAAGTAA 331369
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
||||||||||| || || |||| ||||
Sbjct 331370 GCAGGAACAGTGATGACTGCAT-TGTT 331395
Score = 89.7 bits (98), Expect = 4e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485
|||| ||| || ||||| ||||||||||| | |||||| || || ||||| ||||| ||
Sbjct 330055 GCAGACACGTTGAGAATGCCATTGGCATCAATATCAAAGGTCACCTCAATCTGAGGAACT 330114
Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545
||||| |||||||||| || || | | ||| | ||||| |||||||||| |||
Sbjct 330115 CCTCTGGGAGCAGGTGGAATACCAGTGAGTTCAAACTTCCCCAGGATATTATTATCCTTA 330174
Query 281546 GT 281547
||
Sbjct 330175 GT 330176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740344760786868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |