Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq755 259 5e-64 seq1721 129 6e-25 seq210 123 2e-23 seq1980 107 2e-18 >seq755 Length=318311 Score = 259 bits (286), Expect = 5e-64 Identities = 987/1532 (64%), Gaps = 48/1532 (3%) Strand=Plus/Plus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||||||| | || ||| | | || || | |||||||||||||| || || | || Sbjct 109854 TCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGG 109913 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || | |||||| || | | || | ||||||||||| |||| ||||| ||||| | Sbjct 109914 TGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGG 109973 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT---ATTT 148413 || |||||||| || | |||||| ||| | || ||| ||||| || | Sbjct 109974 AGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCG---TTTTTGGCGATCT 110030 Query 148414 TGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACT 148473 | |||||| | ||||||||| || | ||| ||| | |||||||||||||| Sbjct 110031 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACT 110090 Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 |||| ||||| ||| | ||| ||||||||||| ||| || ||| | | || | Sbjct 110091 GCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTG 110150 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 |||| |||||||||||||| || || ||||||| || |||||| || || |||||| Sbjct 110151 CCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGA 110210 Query 148594 GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 ||||| ||| |||||| |||| ||||| | | || ||||| || | | Sbjct 110211 GCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAAC 110270 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC- 148712 | || || || | || || |||| ||| ||||||| | | | ||| || || Sbjct 110271 CTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGA-ATTCTC-AGCT-TCAGGCA 110327 Query 148713 --GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT-AATT 148769 || |||| |||| |||||| ||||||| || || || | || || || | | Sbjct 110328 CTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACAT 110387 Query 148770 CTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC-----GATGCATCGGTTCACGGCGA 148824 || ||| || ||| || | ||| || | || | | ||| | ||||| Sbjct 110388 ACGC-CAGTTTTTTAAAGTC--AAAAGTCCGCTCCGGGGTGACGTACATGTTGAGGGCGA 110444 Query 148825 TAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGC 148884 | ||||| ||||| || || || ||| || || | |||| || ||||| || | || Sbjct 110445 TGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGC 110504 Query 148885 ACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 | || |||||||| ||||| ||||| |||| || |||||||| |||||||| |||| Sbjct 110505 AGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 110564 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGAT 149001 | ||||||||||||||||| || || ||| ||||| || | || | ||| Sbjct 110565 CTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACC--- 110621 Query 149002 GCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 ||| | ||| || ||| ||| | | || |||| ||| || || || | Sbjct 110622 ACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGA 110681 Query 149062 GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGA 149121 || ||| ||| |||| || |||| ||||| || || || || || || ||||| | Sbjct 110682 GCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCA 110741 Query 149122 GCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGT 149181 | ||||| | || | ||| | |||||| ||||||||||| | ||| || |||| Sbjct 110742 GAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGT 110801 Query 149182 ACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGC 149241 | | ||||| | ||| | || || || |||| ||| | ||| | | Sbjct 110802 AGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGT 110861 Query 149242 TGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC------CTTGCGCT 149295 ||| | ||| |||||||||||| | ||||| |||| || || |||| | Sbjct 110862 CGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTG---T 110918 Query 149296 TGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 |||| ||||||||||||| ||| || ||||||| | |||| | ||| || | | | Sbjct 110919 TGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCC 110978 Query 149356 CACTGGCAGTGCCGTTAGT---AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCA 149412 | ||| |||| || || |||| ||| || || | || | | | Sbjct 110979 CGTTGGAGTTGCCATTGGTACCAGAG---ATGTAGCTTCCTGTGGATCTGATGCAGCTGA 111035 Query 149413 CGTTGACGCCGATGCCGCC-GCCGTACTTTGAGAT--GGCCGCGCAGTCGCCGAGCGTCG 149469 | || |||||||| || |||| |||| ||||| || | | | | | ||| ||| Sbjct 111036 CCGCCACACCGATGCCTCCAGCCG-ACTTGGAGATGAGGGCACACTGCTTCAGAGTGTC- 111093 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 |||||||| |||||||||||| ||||||| ||||| ||||| | ||| || | Sbjct 111094 -ATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTG 111152 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | || || || ||| | || ||| |||||| || || | |||| || Sbjct 111153 GCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACA 111212 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 || | ||| | ||||| | || ||||| ||||| |||| || || | Sbjct 111213 GCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCC 111272 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 ||| ||||| |||||||| ||||| ||||||||| || || | || ||| | Sbjct 111273 TCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATAGGAGC 111332 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAG 149741 || || |||||| |||| ||| | |||||| Sbjct 111333 GCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAG 111364 >seq1721 Length=144067 Score = 129 bits (142), Expect = 6e-25 Identities = 150/200 (75%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 118125 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 118067 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||||||||| || || |||||||||||||| ||| || || Sbjct 118066 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCT 118007 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | ||||| ||||||| || |||| ||||| ||| ||||| || || | Sbjct 118006 TGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGG 117947 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| || || ||||||||| Sbjct 117946 TTTTCACAAAGATCTGCATG 117927 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| ||||| || || ||||| || | ||| | | | ||||| |||||||||| Sbjct 118353 GGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 118295 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| |||||||| |||||| || Sbjct 118294 CAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCT 118235 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| || || | Sbjct 118234 TGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGG 118175 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 118174 TCTTGACGAAGATCTGCAT 118156 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| | | | ||||| ||||||||||| Sbjct 118580 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCCTCCAGCTGCTTGCC 118522 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || ||||||||| || || || ||||||||||| |||||| ||| Sbjct 118521 AGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTT 118462 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| ||||||| || || | ||||| ||| || || || || || Sbjct 118461 GACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGT 118402 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 118401 CTTGACGAAGATCTGCAT 118384 >seq210 Length=679747 Score = 123 bits (136), Expect = 2e-23 Identities = 153/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | ||| ||| | || || |||||||| | Sbjct 555958 GGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCA-TCTTCCAGCTGCTTAC 555900 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || |||| ||||||||| |||||||| || || ||||| ||| ||| || Sbjct 555899 CGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGAT-TTTAGCT 555841 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | |||||| |||||||||| || | |||| ||| |||||||| || Sbjct 555840 TTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTCTTGCCGGTGAGG 555781 Query 133641 GTTTTTACGAAAATCTGCATGGCT 133664 || || || || ||||||||| || Sbjct 555780 GTCTTCACAAAGATCTGCATGCCT 555757 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| || ||||| || | ||| ||| | || || |||| Sbjct 555736 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCA-TCTTCCAGCT 555678 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || |||| ||||||||| |||||||| || || ||||| ||||| Sbjct 555677 GCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCT 555618 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || || | | ||| | |||||| |||||||||| || | ||||| ||| || || | Sbjct 555617 TTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAG 555558 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || |||||||| Sbjct 555557 TCAAGGTCTTCACAAAGATCTGCAT 555533 >seq1980 Length=102293 Score = 107 bits (118), Expect = 2e-18 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||||||||||||||| | ||||||||||||| ||||||| ||||| || | || | Sbjct 5473 TGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGT 5532 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||||| |||||||| |||||||| || |||||||| ||| || ||||| Sbjct 5533 TGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTC 5584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483385643222320