Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq84 122 1e-22
seq82 109 6e-19
>seq84
Length=948360
Score = 122 bits (134), Expect = 1e-22
Identities = 230/336 (68%), Gaps = 12/336 (4%)
Strand=Plus/Minus
Query 176945 GGCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTA 177004
|||||| || | || || ||| |||||| |||||| ||||| ||||| ||| ||| |
Sbjct 424501 GGCCAGCTCCTTGGGCGAGGTGAAGTCGTCCACGTGGATGAAGGCGTCCCCCTGGATAAA 424442
Query 177005 ATTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGA 177064
|| ||||| |||| || | | ||||| || | || || | || | |||||
Sbjct 424441 GTTCTCGTAGTTCTGCCTGGGCGGGCCGAGAACCACTGGCACTGTCCCCAC----AGAGA 424386
Query 177065 TCGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGAT 177120
||| || ||||| || ||||| |||||| |||| | |||||||||||| || || |
Sbjct 424385 GCGGGTTGTACAGTTTCTCAGTAATGTAGTCCTTGTGGATGGAGTTCTCAAAAGCCAGGT 424326
Query 177121 AGAATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTAC 177178
|||| |||||| | ||| || |||| | |||| | || | || || || || |
Sbjct 424325 AGAACTTACAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTACTCCCCGAA 424268
Query 177179 TACGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCT 177238
| | || || | || | || |||||||| ||||| |||||| || |
Sbjct 424267 GGCTTGTCCATAGGCGTGAACCTCAATGTGTTTGTACAGCTCATTATAGTATTTCACCCG 424208
Query 177239 CACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCA 177274
||||||||| | |||||| |||||||||| ||||||
Sbjct 424207 CACGTGGTCCTGGTTCCAGTTGCTGACGATCCAGCA 424172
>seq82
Length=938037
Score = 109 bits (120), Expect = 6e-19
Identities = 567/892 (64%), Gaps = 22/892 (2%)
Strand=Plus/Plus
Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179
||| |||||||| || | ||||||| | | ||| | ||| || | |||||
Sbjct 66630 ATCAAACTTGTTGGCCAGCAGGTGAGGT---TGACTCAGGACCCAGTTGATGTCCCCAAC 66686
Query 162180 TCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATC 162239
||| |||||||||||| | ||| | ||| | ||||| || |||| || |
Sbjct 66687 TCCATACACGCACACGGCTCTTCTGTGAATACCGGTACACGGGTAGTAGGGGGCTCCTTT 66746
Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299
| || ||| || || | || |||||| || | | | || ||||||||||| ||
Sbjct 66747 TTGCATATCTCCTTCTAAATAGCTCCACTTGACCACGCGGGCGAGGGCCTGCATGTCTGA 66806
Query 162300 GGTGTCGTACTTGTACACTGAC-GGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358
| |||| ||||||| | ||| | ||||| | ||| ||||| || | ||||| | |
Sbjct 66807 GATGTCATACTTGT-CGCTGGCAGGCACAGATCCGGGAACTGAAGGAATCCTCTGCAAGG 66865
Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418
| ||||||||||| || || || || ||||| |||||| |||||||| |||| |
Sbjct 66866 TGGCCCACAGGTGCTCATCAGGGCTGTACGTGTCCTTCTCCCACTCCAGAAACTTTTGAA 66925
Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478
| | || | | | || || ||| || || || | |||||| || | |
Sbjct 66926 TCTCTCCGTCCTCCATCACGTGCTTCACAAAGGCTCTTGTGACCACAAAGTAGGCATTTC 66985
Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGT-TGACTACC 162537
|||| |||| ||| ||| || || ||||| ||||| | ||| | || |
Sbjct 66986 CAGAGAACATGGGGCTGCTGATGGGCGGGGGAGGTTTGT----GCACGTATGTGTTTGTG 67041
Query 162538 ATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCT--TACTGGTAGACGGGT 162595
| || || ||| || | ||| | || ||| |||| || |||
Sbjct 67042 AGGCCATCAGTGACGTTGTAATGAAACTGCCAGCGGGTTTTCTTGTACT----CACTGGT 67097
Query 162596 G--TTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAG 162653
| ||| |||| | ||||| || | ||||||||| |||||||||
Sbjct 67098 GACTTCACTCTCCATGCTGTTCTTTCCATTGAGGGCCTTCAGTGCTTTTACCATCTCTCC 67157
Query 162654 ATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAAC-GC 162712
||| || || | ||| ||||| || |||||| || | | || |||| || || |
Sbjct 67158 ATTTGTTTTGATGGGGAAGTCTGTCCCGCAGGTGTTCAGCAGGTACCTCCAGTTGACTGG 67217
Query 162713 TGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGT 162772
|||| | |||||||| | ||||||||||| ||||| || | |||||| ||||
Sbjct 67218 AGAGTGC-AGCAGATCCTTCATGCAGTTCAGATCTGCCTGCACTCTGGACCACGAGGCGT 67276
Query 162773 ACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCA 162832
|||| || | || ||| | |||| ||||| ||||| || || ||| | || ||
Sbjct 67277 ACACCACCCGTTCTAACTTGCTGGCTACAAACACATTAGGAAAGCATGAAGCAATGGCCG 67336
Query 162833 TCACGGC-CAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891
||| || ||| ||| | | ||| || || ||||||||||| | |||
Sbjct 67337 CCACAGCTTTCTGA-AACTCTGCAGAGGACTTCTGGTCCACATGTACGCAGTAGACGTTC 67395
Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951
|| || ||||| | || | ||| | || ||| |||||||| ||||| | || | |||
Sbjct 67396 TGGGGCGCGTACACAGCTCGCAGAAGTCGCTCAAACATCTCAATCTTCTCATGGATCACC 67455
Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAA 163003
|| || ||||| ||||| || | ||||||| |||||||| ||||||
Sbjct 67456 ATTGAGTACGCAATGGGAAAGTTTTCCTCCTCTTTACTGAGAGTTTCTGTAA 67507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578389933532800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |