Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq84 122 1e-22 seq82 109 6e-19 >seq84 Length=948360 Score = 122 bits (134), Expect = 1e-22 Identities = 230/336 (68%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 176945 GGCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTA 177004 |||||| || | || || ||| |||||| |||||| ||||| ||||| ||| ||| | Sbjct 424501 GGCCAGCTCCTTGGGCGAGGTGAAGTCGTCCACGTGGATGAAGGCGTCCCCCTGGATAAA 424442 Query 177005 ATTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGA 177064 || ||||| |||| || | | ||||| || | || || | || | ||||| Sbjct 424441 GTTCTCGTAGTTCTGCCTGGGCGGGCCGAGAACCACTGGCACTGTCCCCAC----AGAGA 424386 Query 177065 TCGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGAT 177120 ||| || ||||| || ||||| |||||| |||| | |||||||||||| || || | Sbjct 424385 GCGGGTTGTACAGTTTCTCAGTAATGTAGTCCTTGTGGATGGAGTTCTCAAAAGCCAGGT 424326 Query 177121 AGAATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTAC 177178 |||| |||||| | ||| || |||| | |||| | || | || || || || | Sbjct 424325 AGAACTTACAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTACTCCCCGAA 424268 Query 177179 TACGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCT 177238 | | || || | || | || |||||||| ||||| |||||| || | Sbjct 424267 GGCTTGTCCATAGGCGTGAACCTCAATGTGTTTGTACAGCTCATTATAGTATTTCACCCG 424208 Query 177239 CACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCA 177274 ||||||||| | |||||| |||||||||| |||||| Sbjct 424207 CACGTGGTCCTGGTTCCAGTTGCTGACGATCCAGCA 424172 >seq82 Length=938037 Score = 109 bits (120), Expect = 6e-19 Identities = 567/892 (64%), Gaps = 22/892 (2%) Strand=Plus/Plus Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179 ||| |||||||| || | ||||||| | | ||| | ||| || | ||||| Sbjct 66630 ATCAAACTTGTTGGCCAGCAGGTGAGGT---TGACTCAGGACCCAGTTGATGTCCCCAAC 66686 Query 162180 TCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATC 162239 ||| |||||||||||| | ||| | ||| | ||||| || |||| || | Sbjct 66687 TCCATACACGCACACGGCTCTTCTGTGAATACCGGTACACGGGTAGTAGGGGGCTCCTTT 66746 Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299 | || ||| || || | || |||||| || | | | || ||||||||||| || Sbjct 66747 TTGCATATCTCCTTCTAAATAGCTCCACTTGACCACGCGGGCGAGGGCCTGCATGTCTGA 66806 Query 162300 GGTGTCGTACTTGTACACTGAC-GGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | |||| ||||||| | ||| | ||||| | ||| ||||| || | ||||| | | Sbjct 66807 GATGTCATACTTGT-CGCTGGCAGGCACAGATCCGGGAACTGAAGGAATCCTCTGCAAGG 66865 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||||||||| || || || || ||||| |||||| |||||||| |||| | Sbjct 66866 TGGCCCACAGGTGCTCATCAGGGCTGTACGTGTCCTTCTCCCACTCCAGAAACTTTTGAA 66925 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 | | || | | | || || ||| || || || | |||||| || | | Sbjct 66926 TCTCTCCGTCCTCCATCACGTGCTTCACAAAGGCTCTTGTGACCACAAAGTAGGCATTTC 66985 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGT-TGACTACC 162537 |||| |||| ||| ||| || || ||||| ||||| | ||| | || | Sbjct 66986 CAGAGAACATGGGGCTGCTGATGGGCGGGGGAGGTTTGT----GCACGTATGTGTTTGTG 67041 Query 162538 ATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCT--TACTGGTAGACGGGT 162595 | || || ||| || | ||| | || ||| |||| || ||| Sbjct 67042 AGGCCATCAGTGACGTTGTAATGAAACTGCCAGCGGGTTTTCTTGTACT----CACTGGT 67097 Query 162596 G--TTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAG 162653 | ||| |||| | ||||| || | ||||||||| ||||||||| Sbjct 67098 GACTTCACTCTCCATGCTGTTCTTTCCATTGAGGGCCTTCAGTGCTTTTACCATCTCTCC 67157 Query 162654 ATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAAC-GC 162712 ||| || || | ||| ||||| || |||||| || | | || |||| || || | Sbjct 67158 ATTTGTTTTGATGGGGAAGTCTGTCCCGCAGGTGTTCAGCAGGTACCTCCAGTTGACTGG 67217 Query 162713 TGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGT 162772 |||| | |||||||| | ||||||||||| ||||| || | |||||| |||| Sbjct 67218 AGAGTGC-AGCAGATCCTTCATGCAGTTCAGATCTGCCTGCACTCTGGACCACGAGGCGT 67276 Query 162773 ACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCA 162832 |||| || | || ||| | |||| ||||| ||||| || || ||| | || || Sbjct 67277 ACACCACCCGTTCTAACTTGCTGGCTACAAACACATTAGGAAAGCATGAAGCAATGGCCG 67336 Query 162833 TCACGGC-CAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891 ||| || ||| ||| | | ||| || || ||||||||||| | ||| Sbjct 67337 CCACAGCTTTCTGA-AACTCTGCAGAGGACTTCTGGTCCACATGTACGCAGTAGACGTTC 67395 Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951 || || ||||| | || | ||| | || ||| |||||||| ||||| | || | ||| Sbjct 67396 TGGGGCGCGTACACAGCTCGCAGAAGTCGCTCAAACATCTCAATCTTCTCATGGATCACC 67455 Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAA 163003 || || ||||| ||||| || | ||||||| |||||||| |||||| Sbjct 67456 ATTGAGTACGCAATGGGAAAGTTTTCCTCCTCTTTACTGAGAGTTTCTGTAA 67507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578389933532800